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WormBase Tree Display for Gene: WBGene00017765

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Name Class

WBGene00017765SMapS_parentSequenceF25B4
IdentityVersion2
NameCGC_namegcst-1Person_evidenceWBPerson1997
Sequence_nameF25B4.1
Molecular_nameF25B4.1
F25B4.1.1
CE09620
Other_nameCELE_F25B4.1Accession_evidenceNDBBX284605
Public_namegcst-1
DB_infoDatabase (13)
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:59WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
224 May 2012 16:35:53WBPerson2970Name_changeCGC_namegcst-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classgcst
Allele (38)
StrainWBStrain00001589
WBStrain00002381
WBStrain00037899
RNASeq_FPKM (74)
GO_annotation00076858
00076859
00076860
00076861
00076862
00076863
00076864
00123078
00123079
Ortholog (35)
ParalogWBGene00010847Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00009503Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00013718Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00015250Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00015251Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00021355Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00021564Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionConcise_descriptiongcst-1 is orthologous to the human gene GLYCINE CLEAVAGE SYSTEM T-PROTEIN (AMT; OMIM:238310), which when mutated leads to glycine encephalopathy.Curator_confirmedWBPerson1823
WBPerson567
Date_last_updated06 Aug 2004 00:00:00
Automated_descriptionPredicted to enable aminomethyltransferase activity and transaminase activity. Predicted to be involved in glycine catabolic process. Predicted to be located in mitochondrion. Human ortholog(s) of this gene implicated in glycine encephalopathy. Is an ortholog of human AMT (aminomethyltransferase).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:9268Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:473)
Molecular_infoCorresponding_CDSF25B4.1
Corresponding_transcriptF25B4.1.1
Other_sequence (63)
Associated_featureWBsf646823
WBsf231790
WBsf231791
WBsf231792
WBsf231793
WBsf231794
Experimental_infoRNAi_resultWBRNAi00013845Inferred_automaticallyRNAi_primary
WBRNAi00113373Inferred_automaticallyRNAi_primary
WBRNAi00045465Inferred_automaticallyRNAi_primary
WBRNAi00106967Inferred_automaticallyRNAi_primary
WBRNAi00113372Inferred_automaticallyRNAi_primary
WBRNAi00033334Inferred_automaticallyRNAi_primary
Expr_patternChronogram211
Chronogram1570
Expr5844
Expr5845
Expr1028954
Expr1037629
Expr1149384
Expr2011975
Expr2030212
Drives_constructWBCnstr00002429
WBCnstr00004340
WBCnstr00027038
Construct_productWBCnstr00027038
Microarray_results (24)
Expression_cluster (134)
InteractionWBInteraction000047684
WBInteraction000104399
WBInteraction000105757
WBInteraction000105947
WBInteraction000112731
WBInteraction000140090
WBInteraction000140332
WBInteraction000140564
WBInteraction000140681
WBInteraction000140704
WBInteraction000141024
WBInteraction000143065
WBInteraction000143611
WBInteraction000144374
WBInteraction000146936
WBInteraction000147358
WBInteraction000153141
WBInteraction000157702
WBInteraction000164823
WBInteraction000168849
WBInteraction000172344
WBInteraction000181152
WBInteraction000181162
WBInteraction000183563
WBInteraction000184604
WBInteraction000190954
WBInteraction000194534
WBInteraction000200005
WBInteraction000201319
WBInteraction000201496
WBInteraction000205176
WBInteraction000206530
WBInteraction000207636
WBInteraction000212439
WBInteraction000215505
WBInteraction000215624
WBInteraction000216082
WBInteraction000225124
WBInteraction000231236
WBInteraction000240113
WBInteraction000249044
WBInteraction000251067
WBInteraction000256606
WBInteraction000256607
WBInteraction000256832
WBInteraction000259152
WBInteraction000262194
WBInteraction000263579
WBInteraction000267015
WBInteraction000276238
WBInteraction000282146
WBInteraction000285801
WBInteraction000290121
WBInteraction000294919
WBInteraction000294921
WBInteraction000301261
WBInteraction000302405
WBInteraction000302433
WBInteraction000302672
WBInteraction000303019
WBInteraction000304678
WBInteraction000305399
WBInteraction000305792
WBInteraction000312206
WBInteraction000312545
WBInteraction000320018
WBInteraction000324572
WBInteraction000326940
WBInteraction000334382
WBInteraction000338094
WBInteraction000338920
WBInteraction000355099
WBInteraction000371385
WBInteraction000372656
WBInteraction000379946
WBInteraction000385298
WBInteraction000386342
WBInteraction000392606
WBInteraction000392841
WBInteraction000396492
WBInteraction000401110
WBInteraction000415014
WBInteraction000415388
WBInteraction000420824
WBInteraction000430835
WBInteraction000435199
WBInteraction000436188
WBInteraction000436847
WBInteraction000440897
WBInteraction000442373
WBInteraction000443676
WBInteraction000451119
WBInteraction000461952
WBInteraction000462809
WBInteraction000464696
WBInteraction000467131
WBInteraction000467867
WBInteraction000468343
WBInteraction000473568
WBInteraction000520018
WBInteraction000539724
WBInteraction000557827
WBInteraction000563892
WBInteraction000576462
WBInteraction000578088
WBInteraction000585064
Map_infoMapVPosition-1.16141
PositivePositive_cloneF25B4Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00038491
WBPaper00042204
WBPaper00055090
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene