WormBase Tree Display for Gene: WBGene00017727
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| WBGene00017727 | SMap | S_parent | Sequence | F22H10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F22H10.3 | |||||||
| Molecular_name | F22H10.3 | ||||||||
| F22H10.3.1 | |||||||||
| CE09572 | |||||||||
| Other_name | CELE_F22H10.3 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | F22H10.3 | ||||||||
| DB_info | Database | AceView | gene | XR292 | |||||
| WormQTL | gene | WBGene00017727 | |||||||
| WormFlux | gene | WBGene00017727 | |||||||
| NDB | locus_tag | CELE_F22H10.3 | |||||||
| NCBI | gene | 54162001 | |||||||
| RefSeq | protein | NM_001381178.1 | |||||||
| TrEMBL | UniProtAcc | Q94188 | |||||||
| UniProt_GCRP | UniProtAcc | Q94188 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (13) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00036303 | Caenorhabditis briggsae | From_analysis | OMA | |||||
| WormBase-Compara | |||||||||
| WBGene00083840 | Caenorhabditis remanei | From_analysis | OMA | ||||||
| WBGene00123550 | Caenorhabditis japonica | From_analysis | OMA | ||||||
| WBGene00127397 | Caenorhabditis japonica | From_analysis | OMA | ||||||
| WBGene00133847 | Caenorhabditis japonica | From_analysis | OMA | ||||||
| WBGene00144311 | Caenorhabditis brenneri | From_analysis | OMA | ||||||
| Cnig_chr_X.g22411 | Caenorhabditis nigoni | From_analysis | WormBase-Compara | ||||||
| Sp34_X0044800 | Caenorhabditis inopinata | From_analysis | WormBase-Compara | ||||||
| chrX_pilon.g20906 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in several structures, including head mesodermal cell; neurons; pharyngeal-intestinal valve; rectal epithelial cell; and rectum based on microarray; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; skn-1; and hsf-1 based on microarray and RNA-seq studies. Is affected by twelve chemicals including rotenone; D-glucopyranose; and Psoralens based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F22H10.3 | |||||||
| Corresponding_transcript | F22H10.3.1 | ||||||||
| Other_sequence | CJC01534_1 | ||||||||
| CJC15770_1 | |||||||||
| CJC01070_1 | |||||||||
| CJC12015_1 | |||||||||
| CJC17607_1 | |||||||||
| CBC01282_1 | |||||||||
| CR04407 | |||||||||
| CJC05094_1 | |||||||||
| CRC08547_1 | |||||||||
| Associated_feature | WBsf654707 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00031300 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00013787 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00045368 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1022499 | ||||||||
| Expr1149293 | |||||||||
| Expr2002893 | |||||||||
| Expr2021110 | |||||||||
| Drives_construct | WBCnstr00027067 | ||||||||
| Construct_product | WBCnstr00027067 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (197) | |||||||||
| Interaction (142) | |||||||||
| Map_info | Positive | Positive_clone | F22H10 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | 24.0578 | |||||||
| Method | Gene |
