WormBase Tree Display for Gene: WBGene00017701
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| WBGene00017701 | SMap | S_parent | Sequence | F22D3 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | ||||||||
| Name | Sequence_name | F22D3.5 | ||||||||
| Molecular_name | F22D3.5 | |||||||||
| Other_name | CELE_F22D3.5 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | F22D3.5 | |||||||||
| DB_info | Database | AceView | gene | 2H228 | ||||||
| WormQTL | gene | WBGene00017701 | ||||||||
| WormFlux | gene | WBGene00017701 | ||||||||
| NDB | locus_tag | CELE_F22D3.5 | ||||||||
| NCBI | gene | 184826 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | |||
| 2 | 21 Sep 2017 13:57:21 | WBPerson1983 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Allele | WBVar01499702 | |||||||||
| WBVar01498435 | ||||||||||
| WBVar00741164 | ||||||||||
| WBVar00741165 | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Paralog | WBGene00014730 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | ||||||
| Structured_description | Automated_description | Enriched in several structures, including ABalaapppa; ABalapaapa; ABalappaap; ABalppappa; and ABalpppappp based on single-cell RNA-seq studies. Is affected by several genes including sir-2.1; clk-1; and pgl-1 based on microarray and RNA-seq studies. Is affected by hydrogen sulfide and silicon dioxide nanoparticle based on microarray studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | F22D3.5:wp155 | ||||||||
| F22D3.5:wp261 | ||||||||||
| Corresponding_pseudogene | F22D3.5 | |||||||||
| Experimental_info | Expr_pattern | Expr1149232 | ||||||||
| Expr2002858 | ||||||||||
| Expr2021075 | ||||||||||
| Drives_construct | WBCnstr00027091 | |||||||||
| Construct_product | WBCnstr00027091 | |||||||||
| Microarray_results | SMD_F22D3.5 | |||||||||
| Aff_F22D3.5 | ||||||||||
| Expression_cluster (33) | ||||||||||
| Interaction | WBInteraction000352989 | |||||||||
| WBInteraction000391526 | ||||||||||
| WBInteraction000405750 | ||||||||||
| WBInteraction000438395 | ||||||||||
| Map_info | Positive | Positive_clone | F22D3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Interpolated_map_position | II | 0.145946 | ||||||||
| Reference | WBPaper00031800 | |||||||||
| Method | Gene |
