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WormBase Tree Display for Gene: WBGene00017589

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Name Class

WBGene00017589SMapS_parentSequenceF19B10
IdentityVersion1
NameSequence_nameF19B10.10
Molecular_nameF19B10.10
F19B10.10.1
CE09477
F19B10.10.2
Other_nameCELE_F19B10.10Accession_evidenceNDBBX284602
Public_nameF19B10.10
DB_infoDatabaseAceViewgene2D968
WormQTLgeneWBGene00017589
WormFluxgeneWBGene00017589
NDBlocus_tagCELE_F19B10.10
PanthergeneCAEEL|WormBase=WBGene00017589|UniProtKB=O02075
familyPTHR21447
NCBIgene173712
RefSeqproteinNM_062212.7
TREEFAMTREEFAM_IDTF322243
TrEMBLUniProtAccO02075
UniProt_GCRPUniProtAccO02075
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:59WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (184)
RNASeq_FPKM (74)
GO_annotation00026482
Ortholog (74)
ParalogWBGene00019672Caenorhabditis elegansFrom_analysisInparanoid_8
WBGene00015641Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00015642Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00015818Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00020665Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00022262Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00022265Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be involved in innate immune response.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF19B10.10
Corresponding_transcriptF19B10.10.1
F19B10.10.2
Other_sequenceMH05711
MHC11421_1
Associated_featureWBsf649975
WBsf987336
WBsf1011947
WBsf222874
Experimental_infoRNAi_resultWBRNAi00076314Inferred_automaticallyRNAi_primary
WBRNAi00031115Inferred_automaticallyRNAi_primary
WBRNAi00013533Inferred_automaticallyRNAi_primary
WBRNAi00044978Inferred_automaticallyRNAi_primary
Expr_patternExpr1021068
Expr1037555
Expr1148947
Expr2002727
Expr2020943
Drives_constructWBCnstr00027182
Construct_productWBCnstr00027182
Microarray_results (17)
Expression_clusterWBPaper00028788:MPK-1_Response_Medium
WBPaper00031040:TGF-beta_adult_downregulated
WBPaper00033065:cyc-1(RNAi)_downregulated
WBPaper00036375:enriched_in_PVD_OLL
WBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:coelomocytes_L2-larva_expressed
WBPaper00037950:germline-precursors_blastula-embryo_expressed
WBPaper00041071:spe-44_upregulated
WBPaper00044736:rising_dev_expression
WBPaper00045420:fertilization_downregulated_transcript
WBPaper00045521:Spermatogenic
WBPaper00045729:gld-2(RNAi)_upregulated
WBPaper00045934:wrn-1(gk99)_upregulated
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_6h
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_12h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_6h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h
WBPaper00048690:hermaphrodite-Z1-Z4-daughter_enriched
WBPaper00048690:hermaphrodite-Z1-Z4_enriched
WBPaper00048690:male-Z1-Z4-daughter_enriched
WBPaper00048690:male-Z1-Z4_enriched
WBPaper00048762:FOG-3_associated
WBPaper00048988:neuron_expressed
WBPaper00049325:CB4856_vs_N2_DEG
WBPaper00049545:jmjd-3.1(+)_downregulated
WBPaper00049942:hsf-1(RNAi)_upregulated
WBPaper00050080:rbr-2(tm3141)_downregulated
WBPaper00050094:mes-2(bn11)_upregulated
WBPaper00050094:mes-6(bn66)_upregulated
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00051039:germline_enriched
WBPaper00051265:F1_morc-1(tm6048)_downregulated
WBPaper00051265:F4_hrde-1(tm1200)_upregulated
WBPaper00051265:F4_morc-1(tm6048)_upregulated
WBPaper00051404:alg-2(ok304)_downregulated
WBPaper00052884:emb-4(hc60)_downregulated
WBPaper00053184:sma-2(rax5)_downregulated
WBPaper00053184:sma-4(rax3)_downregulated
WBPaper00053295:lin-22(icb38)_downregulated
WBPaper00053295:lin-22(ot269)_downregulated
WBPaper00053302:alovudine_24h_regulated
WBPaper00053302:stavudine_24h_regulated
WBPaper00053302:zidovudine_24h_regulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053308:SMG-2_associated_NMD(-)_unaltered_ClassII
WBPaper00053321:embryo-to-L1_downregulated_nos-1(gv5)nos-2(RNAi)_SMARTseq
WBPaper00053321:embryo-to-L1_downregulated_WT_SMARTseq
WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_L1_SMARTseq
WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_starved-L1_Truseq
WBPaper00053599:mitosis_vs_meiosis_downregulated
WBPaper00053599:oocyte_vs_mitosis_downregulated
WBPaper00053909:N2_vs_CB4856_upregulated
WBPaper00055354:Rapamycin-Psora-Allantoin_downregulated
WBPaper00055354:Rapamycin-Rifampicin-Psora_downregulated
WBPaper00055354:Rifampicin-Psora_downregulated
WBPaper00055482:pmt-2(RNAi)_downregulated
WBPaper00055862:antimycin_damt-1(gk961032)_regulated
WBPaper00055971:nhl-2(ok818)_25C_upregulated
WBPaper00056034:pals-22(jy3)_downregulated
WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
WBPaper00056090:E.faecalis_downregulated_N2
WBPaper00056161:male_enriched_siRNA
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
WBPaper00056826:hmc_biased
WBPaper00056855:his-72(uge40)_upregulated
WBPaper00057041:spc-1(cas971)_upregulated
WBPaper00057041:unc-70(cas983)_upregulated
WBPaper00057288:iff-1(RNAi)_downregulated_transcript
WBPaper00058598:mex-3(eu149)_downregulated
WBPaper00058948:PA14_upregulated
WBPaper00059328:mrps-5(RNAi)_downregulated_mRNA
WBPaper00059664:srbc-48(ac23)_downregulated
WBPaper00060014:set-2(tm1630)_upregulated
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
WBPaper00060661:sensory-neuron_depleted
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00061007:HB101_downregulated
WBPaper00061274:microgravity_upregulated
WBPaper00061340:Body_wall_muscle
WBPaper00061340:GLR
WBPaper00061340:hmc
WBPaper00061340:hmc_and_homolog
WBPaper00061340:hmc_homolog
WBPaper00061340:RID_parent
WBPaper00061340:Z1_Z4
WBPaper00061478:pie-1(ne4433)_upregulated
WBPaper00061479:HDA-1_interacting_protein
WBPaper00061479:mep-1(ne4629)_upregulated
WBPaper00061527:swsn-2.2_209-ets-6
WBPaper00061699:daf-18(ok480)_upregulated
WBPaper00061753:csr-1(tor159)_downregulated_25C
WBPaper00061818:ELKS-1_interacting
WBPaper00062146:MOG-7-degron_2h_regulated
WBPaper00062159:hda-2(ok1479)_downregulated
WBPaper00064088:Day-1-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064088:Day-1-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064107:lin-52(3A)_vs_lin-52(WT)_upregulated
WBPaper00064315:mes-4(bn73)_upregulated_EGCs
WBPaper00064403:Heat-killed-E.Coli_upregulated
WBPaper00064502:nhr-23(kry61);spe-44(fx110)_downregulated
WBPaper00064716:paraquat_upregulated
WBPaper00064933:bcf-1(ylf1)_upregulated_transcript
WBPaper00065258:anchor-cell_enriched
WBPaper00065373:sek-1(km4)_upregulated_cisplatin
WBPaper00065841:1_0
WBPaper00065841:1_2
WBPaper00065841:11_0
WBPaper00065841:18_0
WBPaper00065841:31_0
WBPaper00065841:57_0
WBPaper00065841:57_1
WBPaper00065841:110_0
WBPaper00065975:P-body_vs_oocyte_depleted
WBPaper00065984:pals-17(syb3980)_upregulated
WBPaper00065993:glp-1(e2141)_downregulated
cgc4489_group_15
WBPaper00025141:N2_Expressed_Genes
WBPaper00026929:Resveratrol_regulated_daf-16
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00027111:rde-3(r459)_downregulated
WBPaper00031003:24hr_muscle_depleted
WBPaper00031003:total_muscle_depleted
WBPaper00033101:spr-5_regulated
WBPaper00035873:dpy-9_regulated
WBPaper00035873:dpy-10_regulated
WBPaper00036286:Pattern_F
WBPaper00038172:tax-6null_down_regulated
WBPaper00038427:lin-54_embryo_changed
WBPaper00040858:eQTL_age_regulated_aging
WBPaper00040858:eQTL_age_regulated_developing
WBPaper00040858:eQTL_regulated_juvenile
WBPaper00040858:eQTL_regulated_old
WBPaper00040858:eQTL_regulated_reproductive
WBPaper00040963:Q100_down
WBPaper00041174:genotypic
WBPaper00041174:genotypic_prime
WBPaper00041606:CE_S.marcescens_regulated
WBPaper00042258:DA1877_downregulated_GravidAdult
WBPaper00045263:0.1mM-paraquat_upregulated
WBPaper00045263:isp-1(qm150)_upregulated
WBPaper00045263:nuo-6(qm200)_upregulated
WBPaper00045263:ProLongevity-mtROS_upregulated
WBPaper00045673:colistin_downregulated
WBPaper00045960:L4-lethargus_downregulated
[cgc5767]:expression_class_M
[cgc5767]:expression_class_SM
InteractionWBInteraction000575364
WBInteraction000578759
WBInteraction000584295
Map_infoPositivePositive_cloneF19B10Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionII-6.22994
ReferenceWBPaper00060275
MethodGene