WormBase Tree Display for Gene: WBGene00017574

WBGene00017574 SMap: S_parent: Sequence: F18F11
  Identity: Version: 2
    Name: CGC_name: pxmp-4 Person_evidence: WBPerson7169
            WBPerson117
      Sequence_name: F18F11.1
      Molecular_name: F18F11.1
        F18F11.1.1
        CE17684
      Other_name: CELE_F18F11.1 Accession_evidence: NDB BX284604
      Public_name: pxmp-4
    DB_info: Database: AceView gene 4B88
        WormQTL gene WBGene00017574
        WormFlux gene WBGene00017574
        NDB locus_tag CELE_F18F11.1
        Panther gene CAEEL|WormBase=WBGene00017574|UniProtKB=P91262
          family PTHR15460
        NCBI gene 184650
        RefSeq protein NM_067506.6
        TREEFAM TREEFAM_ID TF105313
        TrEMBL UniProtAcc P91262
        UniProt_GCRP UniProtAcc P91262
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:59 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 15 Jul 2019 14:29:07 WBPerson1983 Name_change: CGC_name: pxmp-4
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pxmp
    Allele (36)
    Strain: WBStrain00001908
      WBStrain00002310
    RNASeq_FPKM (74)
    GO_annotation: 00050384
    Ortholog: WBGene00031904 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00072300 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00158018 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00121309 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      CSP21.g878 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g7724 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g2629 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g22173 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g6384 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g15833 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g6695 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g1767 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g208 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cni-F18F11.1 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g10560 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_05204.g34581 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_23163 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_016245 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g13657 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g7429 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_40039510 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIV_pilon.g9490 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00272495 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00266384 Strongyloides ratti From_analysis: WormBase-Compara
      ZFIN:ZDB-GENE-030131-4872 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:15920 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1891701 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:628782 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Structured_description: Automated_description: Predicted to be located in peroxisomal membrane. Expressed in head. Is an ortholog of human PXMP4 (peroxisomal membrane protein 4). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F18F11.1
    Corresponding_transcript: F18F11.1.1
    Other_sequence (31)
    Associated_feature: WBsf995123
      WBsf1016537
      WBsf1016538
      WBsf229674
      WBsf229675
  Experimental_info: RNAi_result: WBRNAi00111514 Inferred_automatically: RNAi_primary
      WBRNAi00031108 Inferred_automatically: RNAi_primary
      WBRNAi00013521 Inferred_automatically: RNAi_primary
      WBRNAi00044962 Inferred_automatically: RNAi_primary
      WBRNAi00111518 Inferred_automatically: RNAi_primary
      WBRNAi00111510 Inferred_automatically: RNAi_primary
    Expr_pattern: Chronogram1571
      Expr5790
      Expr5791
      Expr1013738
      Expr1148932
      Expr2002720
      Expr2020936
    Drives_construct: WBCnstr00002697
      WBCnstr00004398
      WBCnstr00027195
    Construct_product: WBCnstr00027195
    Microarray_results (19)
    Expression_cluster (121)
    Interaction: WBInteraction000165222
      WBInteraction000306928
      WBInteraction000362036
      WBInteraction000402099
      WBInteraction000437278
      WBInteraction000461447
  Map_info: Positive: Positive_clone: F18F11 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: IV -26.4758
  Reference: WBPaper00038491
    WBPaper00055090
  Method: Gene