WormBase Tree Display for Gene: WBGene00017530
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| WBGene00017530 | SMap | S_parent | Sequence | F16H11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | mfsd-12 | |||||||
| Sequence_name | F16H11.1 | ||||||||
| Molecular_name | F16H11.1 | ||||||||
| F16H11.1.1 | |||||||||
| CE04396 | |||||||||
| Other_name | CELE_F16H11.1 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | mfsd-12 | ||||||||
| DB_info | Database | AceView | gene | XF291 | |||||
| WormQTL | gene | WBGene00017530 | |||||||
| WormFlux | gene | WBGene00017530 | |||||||
| NDB | locus_tag | CELE_F16H11.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00017530|UniProtKB=Q19498 | |||||||
| family | PTHR11328 | ||||||||
| NCBI | gene | 180739 | |||||||
| RefSeq | protein | NM_076398.7 | |||||||
| TREEFAM | TREEFAM_ID | TF314080 | |||||||
| TrEMBL | UniProtAcc | Q19498 | |||||||
| UniProt_GCRP | UniProtAcc | Q19498 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 30 Mar 2020 18:08:27 | WBPerson1983 | Name_change | CGC_name | mfsd-12 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | mfsd | ||||||||
| Allele (84) | |||||||||
| Strain | WBStrain00002476 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00064919 | ||||||||
| 00064920 | |||||||||
| 00064921 | |||||||||
| 00122874 | |||||||||
| 00122875 | |||||||||
| 00122876 | |||||||||
| Ortholog (36) | |||||||||
| Structured_description | Automated_description | Predicted to enable symporter activity. Predicted to be involved in organic substance transport. Predicted to be located in membrane. Is an ortholog of human MFSD12 (major facilitator superfamily domain containing 12). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F16H11.1 | |||||||
| Corresponding_transcript | F16H11.1.1 | ||||||||
| Other_sequence (25) | |||||||||
| Associated_feature (12) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00013425 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00044825 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr5778 | ||||||||
| Expr1013887 | |||||||||
| Expr1037526 | |||||||||
| Expr1148789 | |||||||||
| Expr2002671 | |||||||||
| Expr2020887 | |||||||||
| Drives_construct | WBCnstr00003066 | ||||||||
| WBCnstr00027230 | |||||||||
| Construct_product | WBCnstr00027230 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (133) | |||||||||
| Interaction | WBInteraction000200249 | ||||||||
| WBInteraction000272071 | |||||||||
| WBInteraction000274734 | |||||||||
| WBInteraction000279960 | |||||||||
| WBInteraction000297590 | |||||||||
| WBInteraction000309425 | |||||||||
| WBInteraction000354850 | |||||||||
| WBInteraction000441478 | |||||||||
| WBInteraction000463036 | |||||||||
| WBInteraction000474378 | |||||||||
| Map_info | Map | X | Position | -6.91787 | |||||
| Positive | Positive_clone | F16H11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
