WormBase Tree Display for Gene: WBGene00017524
expand all nodes | collapse all nodes | view schema
| WBGene00017524 | SMap | S_parent | Sequence | F16G10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F16G10.9 | |||||||
| Molecular_name | F16G10.9 | ||||||||
| F16G10.9.1 | |||||||||
| CE45926 | |||||||||
| Other_name | CELE_F16G10.9 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | F16G10.9 | ||||||||
| DB_info | Database | AceView | gene | 2C676 | |||||
| WormQTL | gene | WBGene00017524 | |||||||
| WormFlux | gene | WBGene00017524 | |||||||
| NDB | locus_tag | CELE_F16G10.9 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00017524|UniProtKB=O76594 | |||||||
| family | PTHR21453 | ||||||||
| NCBI | gene | 173593 | |||||||
| RefSeq | protein | NM_061862.4 | |||||||
| TREEFAM | TREEFAM_ID | TF322011 | |||||||
| TrEMBL | UniProtAcc | O76594 | |||||||
| UniProt_GCRP | UniProtAcc | O76594 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (63) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00192075 | Caenorhabditis brenneri | From_analysis | TreeFam | |||||
| WBGene00040996 | Caenorhabditis briggsae | From_analysis | WormBase-Compara | ||||||
| WBGene00040997 | Caenorhabditis briggsae | From_analysis | WormBase-Compara | ||||||
| CBOVI.g1498 | Caenorhabditis bovis | From_analysis | WormBase-Compara | ||||||
| CBOVI.g8057 | Caenorhabditis bovis | From_analysis | WormBase-Compara | ||||||
| CSP38.g7933 | Caenorhabditis quiockensis | From_analysis | WormBase-Compara | ||||||
| chrII_pilon.g3671 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog (88) | |||||||||
| Structured_description | Automated_description | Enriched in hypodermis based on RNA-seq studies. Is affected by several genes including daf-16; daf-12; and rrf-3 based on tiling array; microarray; and RNA-seq studies. Is affected by seven chemicals including methylmercuric chloride; Psoralens; and allantoin based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: TRA-1 regulated and TRA-1 regulated protein R03H10.4. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F16G10.9 | |||||||
| Corresponding_CDS_history | F16G10.9:wp225 | ||||||||
| Corresponding_transcript | F16G10.9.1 | ||||||||
| Associated_feature | WBsf665394 | ||||||||
| WBsf222763 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00013424 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00044824 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1022242 | ||||||||
| Expr1148788 | |||||||||
| Expr2002670 | |||||||||
| Expr2020886 | |||||||||
| Drives_construct | WBCnstr00027235 | ||||||||
| Construct_product | WBCnstr00027235 | ||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster (86) | |||||||||
| Interaction | WBInteraction000156985 | ||||||||
| WBInteraction000225625 | |||||||||
| WBInteraction000254509 | |||||||||
| WBInteraction000282619 | |||||||||
| WBInteraction000292006 | |||||||||
| WBInteraction000294223 | |||||||||
| WBInteraction000320091 | |||||||||
| WBInteraction000351966 | |||||||||
| Map_info | Positive | Positive_clone | F16G10 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | -13.8302 | |||||||
| Method | Gene |
