WormBase Tree Display for Gene: WBGene00017519
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WBGene00017519 | SMap | S_parent | Sequence | F16G10 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | hpo-25 | Paper_evidence | WBPaper00038231 | |||||
Person_evidence | WBPerson26 | ||||||||
Sequence_name | F16G10.4 | ||||||||
Molecular_name | F16G10.4 | ||||||||
F16G10.4.1 | |||||||||
CE19393 | |||||||||
Other_name | CELE_F16G10.4 | Accession_evidence | NDB | BX284602 | |||||
Public_name | hpo-25 | ||||||||
DB_info | Database | AceView | gene | 2C659 | |||||
WormQTL | gene | WBGene00017519 | |||||||
WormFlux | gene | WBGene00017519 | |||||||
NDB | locus_tag | CELE_F16G10.4 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00017519|UniProtKB=O76588 | |||||||
family | PTHR21453 | ||||||||
NCBI | gene | 184579 | |||||||
RefSeq | protein | NM_061856.1 | |||||||
TREEFAM | TREEFAM_ID | TF322011 | |||||||
TrEMBL | UniProtAcc | O76588 | |||||||
UniProt_GCRP | UniProtAcc | O76588 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 26 Apr 2011 13:31:47 | WBPerson2970 | Name_change | CGC_name | hpo-25 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | hpo | ||||||||
Allele (33) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00038533 | ||||||||
Ortholog | WBGene00040996 | Caenorhabditis briggsae | From_analysis | WormBase-Compara | |||||
WBGene00040997 | Caenorhabditis briggsae | From_analysis | WormBase-Compara | ||||||
CBOVI.g1498 | Caenorhabditis bovis | From_analysis | WormBase-Compara | ||||||
CBOVI.g8057 | Caenorhabditis bovis | From_analysis | WormBase-Compara | ||||||
CSP38.g7933 | Caenorhabditis quiockensis | From_analysis | WormBase-Compara | ||||||
chrII_pilon.g3665 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Paralog (88) | |||||||||
Structured_description | Automated_description | Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F16G10.4 | |||||||
Corresponding_transcript | F16G10.4.1 | ||||||||
Experimental_info | RNAi_result | WBRNAi00013420 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00044819 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00088656 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00088763 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1018534 | ||||||||
Expr1148783 | |||||||||
Expr2012564 | |||||||||
Expr2030801 | |||||||||
Drives_construct | WBCnstr00027239 | ||||||||
Construct_product | WBCnstr00027239 | ||||||||
Microarray_results (14) | |||||||||
Expression_cluster (30) | |||||||||
SAGE_tag | SAGE:tccagatttggcgaatt | Strand | Sense | ||||||
Unambiguously_mapped | |||||||||
Interaction (54) | |||||||||
Map_info | Map | II | Position | -13.8308 | Error | 0.000632 | |||
Positive | Positive_clone | F16G10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |