WormBase Tree Display for Gene: WBGene00017497
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| WBGene00017497 | SMap | S_parent | Sequence | F15E11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | irld-32 | Person_evidence | WBPerson260 | |||||
| Sequence_name | F15E11.11 | ||||||||
| Molecular_name | F15E11.11a | ||||||||
| F15E11.11a.1 | |||||||||
| CE51082 | |||||||||
| F15E11.11b | |||||||||
| CE51126 | |||||||||
| F15E11.11c | |||||||||
| CE51147 | |||||||||
| F15E11.11b.1 | |||||||||
| F15E11.11c.1 | |||||||||
| Other_name | F15E11.k | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| F15E11.e | Curator_confirmed | WBPerson1983 | |||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_F15E11.11 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | irld-32 | ||||||||
| DB_info | Database | AceView | gene | 5C811 | |||||
| WormQTL | gene | WBGene00017497 | |||||||
| WormFlux | gene | WBGene00017497 | |||||||
| NDB | locus_tag | CELE_F15E11.11 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00017497|UniProtKB=A0A0M7RDT1 | |||||||
| family | PTHR21662 | ||||||||
| NCBI | gene | 184543 | |||||||
| RefSeq | protein | NM_001316795.1 | |||||||
| NM_001316793.1 | |||||||||
| NM_001316794.1 | |||||||||
| TrEMBL | UniProtAcc | A0A0M7RF64 | |||||||
| A0A0M7REB7 | |||||||||
| A0A0M7RDT1 | |||||||||
| UniProt_GCRP | UniProtAcc | A0A0M7RDT1 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 25 May 2012 15:57:08 | WBPerson2970 | Name_change | CGC_name | irld-32 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | irld | ||||||||
| Allele | WBVar01499528 | ||||||||
| WBVar02122641 | |||||||||
| WBVar01499167 | |||||||||
| WBVar01499537 | |||||||||
| WBVar02123934 | |||||||||
| WBVar01585445 | |||||||||
| WBVar02122841 | |||||||||
| WBVar00308193 | |||||||||
| WBVar01499740 | |||||||||
| WBVar01786552 | |||||||||
| WBVar00452073 | |||||||||
| WBVar02013551 | |||||||||
| WBVar02123415 | |||||||||
| WBVar00310153 | |||||||||
| WBVar02121039 | |||||||||
| WBVar00302148 | |||||||||
| WBVar00305687 | |||||||||
| WBVar00582310 | |||||||||
| WBVar02121241 | |||||||||
| WBVar02121460 | |||||||||
| WBVar01612515 | |||||||||
| WBVar02124610 | |||||||||
| WBVar02124426 | |||||||||
| WBVar00204480 | |||||||||
| WBVar00204481 | |||||||||
| WBVar01499496 | |||||||||
| WBVar02124813 | |||||||||
| WBVar01499316 | |||||||||
| WBVar00992806 | |||||||||
| WBVar00992807 | |||||||||
| WBVar01497486 | |||||||||
| WBVar01500066 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (61) | |||||||||
| Paralog (75) | |||||||||
| Structured_description | Automated_description | Is affected by several genes including let-60; sir-2.1; and clk-1 based on tiling array; RNA-seq; and microarray studies. Is affected by Tunicamycin; resveratrol; and Sirolimus based on microarray studies. Is predicted to encode a protein with the following domains: Receptor L domain; Receptor L-domain; and Receptor L-domain superfamily. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F15E11.11a | |||||||
| F15E11.11b | |||||||||
| F15E11.11c | |||||||||
| Corresponding_CDS_history | F15E11.11:wp250 | ||||||||
| Corresponding_transcript | F15E11.11a.1 | ||||||||
| F15E11.11b.1 | |||||||||
| F15E11.11c.1 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00044727 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00044726 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00044735 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00044728 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00013373 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026603 | ||||||||
| Expr1148697 | |||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster (34) | |||||||||
| Interaction | WBInteraction000170901 | ||||||||
| WBInteraction000194137 | |||||||||
| WBInteraction000211683 | |||||||||
| WBInteraction000215317 | |||||||||
| WBInteraction000331640 | |||||||||
| WBInteraction000344734 | |||||||||
| WBInteraction000400610 | |||||||||
| WBInteraction000401253 | |||||||||
| Map_info | Map | V | Position | -14.8667 | |||||
| Positive | Positive_clone | F15E11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| [200811 gw3] Modified Map position as it was a reverse physical that could not be fixed by automated methods. (-14.8696) | |||||||||
| [200811 gw3] Modified Map position as it was a reverse physical that could not be fixed by automated methods. (-14.8654) | |||||||||
| Method | Gene |
