WormBase Tree Display for Gene: WBGene00017485
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WBGene00017485 | SMap | S_parent | Sequence | F15E6 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | F15E6.4 | |||||||
Molecular_name | F15E6.4 | ||||||||
F15E6.4.1 | |||||||||
CE16993 | |||||||||
Other_name | CELE_F15E6.4 | Accession_evidence | NDB | BX284604 | |||||
Public_name | F15E6.4 | ||||||||
DB_info | Database | AceView | gene | 4F55 | |||||
4F57 | |||||||||
WormQTL | gene | WBGene00017485 | |||||||
WormFlux | gene | WBGene00017485 | |||||||
NDB | locus_tag | CELE_F15E6.4 | |||||||
NCBI | gene | 177193 | |||||||
RefSeq | protein | NM_068134.8 | |||||||
TrEMBL | UniProtAcc | O44495 | |||||||
UniProt_GCRP | UniProtAcc | O44495 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (16) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog | WBGene00082361 | Caenorhabditis remanei | From_analysis | OMA | |||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
FL83_17070 | Caenorhabditis latens | From_analysis | WormBase-Compara | ||||||
GCK72_015282 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||||
chrIV_pilon.g10169 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00074107 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||||
Paralog | WBGene00044472 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | |||||
WormBase-Compara | |||||||||
WBGene00017488 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00044292 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Enriched in ASER; PLM; and hypodermis based on tiling array and RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by twenty-three chemicals including methylmercuric chloride; rotenone; and Tunicamycin based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F15E6.4 | |||||||
Corresponding_transcript | F15E6.4.1 | ||||||||
Associated_feature | WBsf996236 | ||||||||
WBsf996237 | |||||||||
WBsf228180 | |||||||||
Experimental_info | RNAi_result | WBRNAi00031009 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00115918 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00013382 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00044745 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1026346 | ||||||||
Expr1148710 | |||||||||
Expr2002627 | |||||||||
Expr2020844 | |||||||||
Drives_construct | WBCnstr00027261 | ||||||||
Construct_product | WBCnstr00027261 | ||||||||
Microarray_results | SMD_F15E6.4 | ||||||||
180398_s_at | |||||||||
A_12_P116466 | |||||||||
Aff_F15E6.4 | |||||||||
GPL14144_F15E6.4_17-76_0.841_1_A | |||||||||
GPL19516_CGZ0016518 | |||||||||
GPL21109_F15E6.4 | |||||||||
GPL3518_CE16993 | |||||||||
GPL8304_CE_WBGene00017485_A | |||||||||
GPL8673_F15E6_4P00047 | |||||||||
GPL8673_F15E6_4P00050 | |||||||||
GPL8673_F15E6_4P00053 | |||||||||
GPL9450_F15E6.4 | |||||||||
cea2.p.90605 | |||||||||
Expression_cluster (257) | |||||||||
Interaction | WBInteraction000133748 | ||||||||
WBInteraction000254435 | |||||||||
WBInteraction000269180 | |||||||||
WBInteraction000296855 | |||||||||
WBInteraction000345489 | |||||||||
WBInteraction000400944 | |||||||||
WBInteraction000409806 | |||||||||
WBInteraction000429637 | |||||||||
WBInteraction000457316 | |||||||||
WBInteraction000571189 | |||||||||
Map_info | Positive | Positive_clone | F15E6 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | IV | 0.122599 | |||||||
Reference | WBPaper00058665 | ||||||||
Method | Gene |