WormBase Tree Display for Gene: WBGene00017398
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| WBGene00017398 | SMap | S_parent | Sequence | F12B6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | slc-17.6 | Person_evidence | WBPerson260 | |||||
| Sequence_name | F12B6.2 | ||||||||
| Molecular_name (11) | |||||||||
| Other_name | CELE_F12B6.2 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | slc-17.6 | ||||||||
| DB_info | Database | AceView | gene | 1C821 | |||||
| WormQTL | gene | WBGene00017398 | |||||||
| WormFlux | gene | WBGene00017398 | |||||||
| NDB | locus_tag | CELE_F12B6.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00017398|UniProtKB=H2KZQ1 | |||||||
| family | PTHR11662 | ||||||||
| NCBI | gene | 171781 | |||||||
| RefSeq | protein | NM_171833.6 | |||||||
| NM_058546.6 | |||||||||
| NM_001306429.3 | |||||||||
| NR_131354.1 | |||||||||
| NR_131353.1 | |||||||||
| TrEMBL | UniProtAcc | H2KZQ3 | |||||||
| X5M917 | |||||||||
| H2KZQ1 | |||||||||
| UniProt_GCRP | UniProtAcc | H2KZQ1 | |||||||
| RNAcentral | URSid | URS0000730A4E | |||||||
| URS000073A07E | |||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 27 Jun 2014 15:53:55 | WBPerson2970 | Name_change | CGC_name | slc-17.6 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | slc | ||||||||
| Allele (115) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00022470 | ||||||||
| 00022471 | |||||||||
| 00022472 | |||||||||
| 00022473 | |||||||||
| 00105567 | |||||||||
| 00122811 | |||||||||
| 00122812 | |||||||||
| Ortholog (32) | |||||||||
| Paralog (58) | |||||||||
| Structured_description | Automated_description | Predicted to enable transmembrane transporter activity. Predicted to be involved in monoatomic anion transport. Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F12B6.2a | |||||||
| F12B6.2c | |||||||||
| F12B6.2f | |||||||||
| Corresponding_CDS_history | F12B6.2b:wp242 | ||||||||
| F12B6.2d:wp242 | |||||||||
| Corresponding_transcript | F12B6.2d | ||||||||
| F12B6.2e | |||||||||
| F12B6.2a.1 | |||||||||
| F12B6.2c.1 | |||||||||
| F12B6.2f.1 | |||||||||
| Associated_feature | WBsf656039 | ||||||||
| WBsf982834 | |||||||||
| WBsf1009312 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00003367 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00004604 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00044431 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1024173 | ||||||||
| Expr1148377 | |||||||||
| Expr2015862 | |||||||||
| Expr2034095 | |||||||||
| Drives_construct | WBCnstr00027326 | ||||||||
| Construct_product | WBCnstr00027326 | ||||||||
| Microarray_results | SMD_F12B6.2 | ||||||||
| SMD_Y39G10B_248.C | |||||||||
| 193011_at | |||||||||
| A_12_P111948 | |||||||||
| A_12_P117103 | |||||||||
| A_12_P150565 | |||||||||
| A_12_P150566 | |||||||||
| Aff_F12B6.2 | |||||||||
| Aff_Y39G10B_248.C | |||||||||
| GPL13394_WBGene00017398 | |||||||||
| GPL13914_F12B6.2 | |||||||||
| GPL14144_F12B6.2a_1216-1275_0.880_18_C | |||||||||
| GPL14144_F12B6.2a_649-708_0.894_11_B | |||||||||
| GPL14144_F12B6.2a_835-894_0.900_10_A | |||||||||
| GPL19516_CGZ0015706 | |||||||||
| GPL19516_CGZ0015707 | |||||||||
| GPL19516_CGZ0015708 | |||||||||
| GPL19516_CGZ0015709 | |||||||||
| GPL21109_F12B6.2a | |||||||||
| GPL21109_F12B6.2b | |||||||||
| GPL21109_F12B6.2d | |||||||||
| GPL3518_CE30273 | |||||||||
| GPL3518_CE30513 | |||||||||
| GPL8304_CE_WBGene00017398_A | |||||||||
| GPL8304_CE_WBGene00017398_B | |||||||||
| GPL8673_F12B6_2aP00768 | |||||||||
| GPL8673_F12B6_2aP01056 | |||||||||
| GPL8673_F12B6_2aP01411 | |||||||||
| GPL8673_F12B6_2bP00642 | |||||||||
| GPL8673_F12B6_2bP00930 | |||||||||
| GPL8673_F12B6_2bP01285 | |||||||||
| GPL8673_F12B6_2cP00056 | |||||||||
| GPL8673_F12B6_2cP00642 | |||||||||
| GPL8673_F12B6_2cP01285 | |||||||||
| GPL8673_F12B6_2dP00056 | |||||||||
| GPL8673_F12B6_2dP00768 | |||||||||
| GPL8673_F12B6_2dP01056 | |||||||||
| GPL9450_F12B6.2b | |||||||||
| cea2.d.20140 | |||||||||
| Expression_cluster (157) | |||||||||
| Interaction | WBInteraction000139974 | ||||||||
| WBInteraction000219263 | |||||||||
| WBInteraction000234295 | |||||||||
| WBInteraction000289610 | |||||||||
| WBInteraction000334184 | |||||||||
| WBInteraction000371082 | |||||||||
| WBInteraction000468500 | |||||||||
| WBInteraction000468501 | |||||||||
| WBInteraction000581014 | |||||||||
| Map_info | Map | I | Position | -10.5915 | |||||
| Positive | Positive_clone | F12B6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
