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WormBase Tree Display for Gene: WBGene00017329

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Name Class

WBGene00017329SMapS_parentSequenceF10D2
IdentityVersion2
NameCGC_nameugt-39Person_evidenceWBPerson1208
WBPerson655
Sequence_nameF10D2.2
Molecular_nameF10D2.2a
F10D2.2a.1
CE38499
F10D2.2b
CE32861
F10D2.2b.1
Other_nameCELE_F10D2.2Accession_evidenceNDBBX284605
Public_nameugt-39
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:58WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
210 Jun 2005 11:17:00WBPerson2970Name_changeCGC_nameugt-39
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classugt
Allele (27)
RNASeq_FPKM (74)
GO_annotation00022463
00022464
00022465
00022466
00022467
00022468
00122753
OrthologWBGene00036849Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00038364Caenorhabditis briggsaeFrom_analysisOrthoMCL
Inparanoid_8
WormBase-Compara
WBGene00038365Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00064792Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00194105Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
CBOVI.g386Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g10293Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g11879Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g13425Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g15178Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g16087Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g16088Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g3944Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g5179Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g7096Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g7582Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g7915Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g3279Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g1943Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP31.g26650Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g4537Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP38.g8246Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g9890Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g9891Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g9892Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g9893Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP40.g23015Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00898.g14824Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_V.g19997Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp5_scaffold_00328.g9506Caenorhabditis sinicaFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g11508Oscheius tipulaeFrom_analysisWormBase-Compara
chrV_pilon.g14613Caenorhabditis elegansFrom_analysisWormBase-Compara
FB:FBgn0032684Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
SonicParanoid
FB:FBgn0027074Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
SonicParanoid
FB:FBgn0032713Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
SonicParanoid
FB:FBgn0027073Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
SonicParanoid
FB:FBgn0034605Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
SonicParanoid
FB:FBgn0038886Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
SonicParanoid
FB:FBgn0015663Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
SonicParanoid
FB:FBgn0040257Drosophila melanogasterFrom_analysisHieranoid
Inparanoid
OMA
SonicParanoid
FB:FBgn0050438Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
SonicParanoid
ZFIN:ZDB-GENE-040426-2762Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
Panther
ZFIN:ZDB-GENE-060616-129Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
Panther
ZFIN:ZDB-GENE-080721-21Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
Panther
ZFIN:ZDB-GENE-081028-66Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
Panther
ZFIN:ZDB-GENE-050419-23Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
Panther
ZFIN:ZDB-GENE-080305-10Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
Panther
ZFIN:ZDB-GENE-051120-60Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
Panther
ZFIN:ZDB-GENE-060825-206Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
Panther
ZFIN:ZDB-GENE-061103-373Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
Panther
ZFIN:ZDB-GENE-070112-2332Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
Panther
ZFIN:ZDB-GENE-080721-23Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
Panther
ZFIN:ZDB-GENE-081105-106Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
Panther
ZFIN:ZDB-GENE-080227-6Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
Panther
ZFIN:ZDB-GENE-100402-2Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
Panther
ZFIN:ZDB-GENE-100402-3Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
Panther
ZFIN:ZDB-GENE-100406-5Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
Panther
ZFIN:ZDB-GENE-050419-68Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
Panther
ZFIN:ZDB-GENE-091118-36Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
Panther
ZFIN:ZDB-GENE-100406-4Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
Panther
HGNC:12553Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
Panther
SonicParanoid
HGNC:12554Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
Panther
SonicParanoid
HGNC:12544Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
Panther
SonicParanoid
HGNC:12546Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
Panther
SonicParanoid
HGNC:12547Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
Panther
SonicParanoid
HGNC:12555Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
Panther
SonicParanoid
HGNC:12545Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
Panther
SonicParanoid
HGNC:12542Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
Panther
SonicParanoid
HGNC:13479Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
Panther
SonicParanoid
HGNC:28528Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
Panther
SonicParanoid
HGNC:26625Homo sapiensFrom_analysisEnsEMBL-Compara
Inparanoid
OMA
Panther
SonicParanoid
HGNC:27266Homo sapiensFrom_analysisEnsEMBL-Compara
Inparanoid
OMA
Panther
SonicParanoid
MGI:98900Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
Panther
MGI:109522Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
Panther
MGI:1919023Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
Panther
MGI:1919344Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
Panther
MGI:2149905Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
Panther
MGI:2140794Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
Panther
MGI:2140962Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
Panther
MGI:2148239Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
Panther
MGI:3576103Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
Panther
MGI:3576100Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
Panther
MGI:3576095Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
Panther
RGD:3936Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Panther
RGD:3937Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Panther
RGD:3938Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Panther
RGD:69432Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Panther
RGD:620895Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Panther
RGD:628623Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Panther
RGD:708541Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Panther
RGD:708417Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Panther
RGD:1308444Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Panther
RGD:1559459Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Panther
Paralog (74)
Structured_descriptionAutomated_descriptionPredicted to enable UDP-glycosyltransferase activity. Predicted to be located in membrane. Human ortholog(s) of this gene implicated in osteoporosis. Is an ortholog of several human genes including UGT2B10 (UDP glucuronosyltransferase family 2 member B10); UGT2B4 (UDP glucuronosyltransferase family 2 member B4); and UGT2B7 (UDP glucuronosyltransferase family 2 member B7).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:11476Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:12547)
Molecular_infoCorresponding_CDSF10D2.2a
F10D2.2b
Corresponding_CDS_historyF10D2.2a:wp142
Corresponding_transcriptF10D2.2a.1
F10D2.2b.1
Other_sequenceName_isotig08097
Associated_featureWBsf661413
WBsf231943
Experimental_infoRNAi_resultWBRNAi00013046Inferred_automaticallyRNAi_primary
WBRNAi00044241Inferred_automaticallyRNAi_primary
WBRNAi00044242Inferred_automaticallyRNAi_primary
WBRNAi00030763Inferred_automaticallyRNAi_primary
Expr_patternExpr1018252
Expr1148200
Expr2017784
Expr2035922
Drives_constructWBCnstr00027383
Construct_productWBCnstr00027383
Microarray_results (25)
Expression_cluster (171)
InteractionWBInteraction000143459
WBInteraction000151992
WBInteraction000196478
WBInteraction000221155
WBInteraction000265405
WBInteraction000312506
WBInteraction000335773
WBInteraction000375098
Map_infoMapVPosition0.614656Error0.000666
PositivePositive_cloneF10D2Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00038491
WBPaper00055090
WBPaper00055433
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene