WormBase Tree Display for Gene: WBGene00017328
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| WBGene00017328 | SMap | S_parent | Sequence | F10C5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | nemp-1 | Person_evidence | WBPerson555 | |||||
| Sequence_name | F10C5.2 | ||||||||
| Molecular_name | F10C5.2 | ||||||||
| F10C5.2.1 | |||||||||
| CE37715 | |||||||||
| Other_name | CELE_F10C5.2 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | nemp-1 | ||||||||
| DB_info | Database | AceView | gene | 3B91 | |||||
| WormQTL | gene | WBGene00017328 | |||||||
| WormFlux | gene | WBGene00017328 | |||||||
| NDB | locus_tag | CELE_F10C5.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00017328|UniProtKB=Q19293 | |||||||
| family | PTHR13598 | ||||||||
| NCBI | gene | 175204 | |||||||
| RefSeq | protein | NM_064801.9 | |||||||
| SwissProt | UniProtAcc | Q19293 | |||||||
| TREEFAM | TREEFAM_ID | TF314831 | |||||||
| UniProt_GCRP | UniProtAcc | Q19293 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 05 Jul 2018 12:31:10 | WBPerson1983 | Name_change | CGC_name | nemp-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nemp | ||||||||
| Allele (52) | |||||||||
| Strain | WBStrain00003950 | ||||||||
| WBStrain00003951 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00064235 | ||||||||
| 00064236 | |||||||||
| 00064237 | |||||||||
| 00064238 | |||||||||
| Contained_in_operon | CEOP3024 | ||||||||
| Ortholog (38) | |||||||||
| Structured_description | Automated_description | Predicted to be located in nuclear envelope. Expressed in several structures, including arcade cell; pharyngeal cell; pharyngeal-intestinal valve; rectal gland cell; and spermatheca. Is an ortholog of human NEMP1 (nuclear envelope integral membrane protein 1) and NEMP2 (nuclear envelope integral membrane protein 2). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F10C5.2 | |||||||
| Corresponding_CDS_history | F10C5.2:wp134 | ||||||||
| Corresponding_transcript | F10C5.2.1 | ||||||||
| Other_sequence | CR01050 | ||||||||
| Dviv_isotig15612 | |||||||||
| CRC06995_1 | |||||||||
| CBC02461_1 | |||||||||
| CBC01845_1 | |||||||||
| CR11088 | |||||||||
| CJC08325_1 | |||||||||
| Dviv_isotig15611 | |||||||||
| Associated_feature | WBsf644915 | ||||||||
| WBsf991069 | |||||||||
| WBsf1014075 | |||||||||
| WBsf224365 | |||||||||
| WBsf224366 | |||||||||
| WBsf224367 | |||||||||
| Experimental_info | RNAi_result (11) | ||||||||
| Expr_pattern | Expr11304 | ||||||||
| Expr1011900 | |||||||||
| Expr1037451 | |||||||||
| Expr1148189 | |||||||||
| Expr2002382 | |||||||||
| Expr2020600 | |||||||||
| Drives_construct | WBCnstr00018754 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (131) | |||||||||
| Interaction | WBInteraction000031614 | ||||||||
| WBInteraction000517125 | |||||||||
| WBInteraction000561120 | |||||||||
| Map_info | Map | III | Position | -26.8421 | |||||
| Positive | Positive_clone | F10C5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00023069 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00060284 | |||||||||
| WBPaper00061558 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
