WormBase Tree Display for Gene: WBGene00017317
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| WBGene00017317 | SMap | S_parent | Sequence | F09G2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | attf-2 | Person_evidence | WBPerson260 | |||||
| WBPerson1997 | |||||||||
| Sequence_name | F09G2.9 | ||||||||
| Molecular_name | F09G2.9 | ||||||||
| F09G2.9.1 | |||||||||
| CE09304 | |||||||||
| Other_name | CELE_F09G2.9 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | attf-2 | ||||||||
| DB_info | Database | AceView | gene | 5H674 | |||||
| WormQTL | gene | WBGene00017317 | |||||||
| WormFlux | gene | WBGene00017317 | |||||||
| NDB | locus_tag | CELE_F09G2.9 | |||||||
| NCBI | gene | 179106 | |||||||
| RefSeq | protein | NM_072424.8 | |||||||
| TREEFAM | TREEFAM_ID | TF316133 | |||||||
| TrEMBL | UniProtAcc | O17406 | |||||||
| UniProt_GCRP | UniProtAcc | O17406 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 22 Sep 2011 11:35:55 | WBPerson2970 | Name_change | CGC_name | attf-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | attf | ||||||||
| Allele (44) | |||||||||
| Possibly_affected_by | WBVar02154076 | ||||||||
| Strain | WBStrain00048928 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00122746 | ||||||||
| Contained_in_operon | CEOP5140 | ||||||||
| Ortholog (25) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA binding activity. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F09G2.9 | |||||||
| Corresponding_transcript | F09G2.9.1 | ||||||||
| Other_sequence | Tcol_isotig08575 | ||||||||
| CR10567 | |||||||||
| CBC04007_1 | |||||||||
| CJC00135_1 | |||||||||
| CR02698 | |||||||||
| Dviv_isotig22061 | |||||||||
| CRC10174_1 | |||||||||
| CRC03792_1 | |||||||||
| Tcol_isotig08576 | |||||||||
| Associated_feature (13) | |||||||||
| Transcription_factor | WBTranscriptionFactor000982 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00093015 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00001461 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00007979 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00076285 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00030732 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00044181 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00013015 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr10300 | ||||||||
| Expr10301 | |||||||||
| Expr1028162 | |||||||||
| Expr1037446 | |||||||||
| Expr1148141 | |||||||||
| Expr2009515 | |||||||||
| Expr2027752 | |||||||||
| Drives_construct | WBCnstr00015237 | ||||||||
| WBCnstr00015238 | |||||||||
| WBCnstr00027393 | |||||||||
| WBCnstr00042400 | |||||||||
| Construct_product | WBCnstr00016489 | ||||||||
| WBCnstr00027393 | |||||||||
| WBCnstr00038800 | |||||||||
| WBCnstr00042400 | |||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (152) | |||||||||
| Interaction (69) | |||||||||
| Map_info | Map | V | Position | 0.630379 | Error | 0.00185 | |||
| Positive | Positive_clone | F09G2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00025337 | ||||||||
| WBPaper00028621 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
