WormBase Tree Display for Gene: WBGene00017290
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| WBGene00017290 | SMap | S_parent | Sequence | F09E5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F09E5.12 | |||||||
| Molecular_name | F09E5.12 | ||||||||
| F09E5.12.1 | |||||||||
| CE02607 | |||||||||
| F09E5.12.2 | |||||||||
| Other_name | F09E5.c | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_F09E5.12 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | F09E5.12 | ||||||||
| DB_info | Database | AceView | gene | 2F656 | |||||
| WormQTL | gene | WBGene00017290 | |||||||
| WormFlux | gene | WBGene00017290 | |||||||
| NDB | locus_tag | CELE_F09E5.12 | |||||||
| NCBI | gene | 184243 | |||||||
| RefSeq | protein | NM_062606.3 | |||||||
| TrEMBL | UniProtAcc | Q19261 | |||||||
| UniProt_GCRP | UniProtAcc | Q19261 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (50) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | CSP28.g16943 | Caenorhabditis panamensis | From_analysis | WormBase-Compara | |||||
| FL83_06035 | Caenorhabditis latens | From_analysis | WormBase-Compara | ||||||
| GCK72_006003 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||||
| chrII_pilon.g4473 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in neurons based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-12; pgl-1; and alg-1 based on microarray; tiling array; and RNA-seq studies. Is affected by seven chemicals including multi-walled carbon nanotube; Psoralens; and Sirolimus based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F09E5.12 | |||||||
| Corresponding_transcript | F09E5.12.1 | ||||||||
| F09E5.12.2 | |||||||||
| Other_sequence | FC539326.1 | ||||||||
| EY461461.1 | |||||||||
| FC554103.1 | |||||||||
| EW742697.1 | |||||||||
| FC539501.1 | |||||||||
| FC543682.1 | |||||||||
| CR11117 | |||||||||
| EY458503.1 | |||||||||
| EY469226.1 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00044123 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00044124 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00044125 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00110587 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1012590 | ||||||||
| Expr1037430 | |||||||||
| Expr1148089 | |||||||||
| Expr2002344 | |||||||||
| Expr2020562 | |||||||||
| Drives_construct | WBCnstr00027419 | ||||||||
| Construct_product | WBCnstr00027419 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (72) | |||||||||
| Interaction | WBInteraction000568368 | ||||||||
| Map_info | Positive | Positive_clone | F09E5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | -1.7868 | |||||||
| Method | Gene |
