WormBase Tree Display for Gene: WBGene00017289
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| WBGene00017289 | SMap | S_parent | Sequence | F09E5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F09E5.11 | |||||||
| Molecular_name | F09E5.11 | ||||||||
| F09E5.11.1 | |||||||||
| CE39348 | |||||||||
| Other_name | F09E5.d | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_F09E5.11 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | F09E5.11 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (13) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00064064 | ||||||||
| 00064065 | |||||||||
| 00064066 | |||||||||
| 00064067 | |||||||||
| 00064068 | |||||||||
| 00122716 | |||||||||
| Ortholog (35) | |||||||||
| Structured_description | Concise_description | F09E5.11 encodes a divergent ortholog of S. cerevisiae VPH2/VMA12; likeVPH2, F09E5.11 may be required for vacuolar proton-translocating ATPase(V-ATPase) assembly in the endoplasmic reticulum. | Paper_evidence | WBPaper00028773 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 19 Nov 2006 00:00:00 | ||||||||
| Automated_description | Predicted to be involved in vacuolar proton-transporting V-type ATPase complex assembly. Predicted to be located in endomembrane system. Human ortholog(s) of this gene implicated in congenital disorder of glycosylation type IIp. Is an ortholog of human TMEM199 (transmembrane protein 199). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0070268 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:18085) | ||||
| Molecular_info | Corresponding_CDS | F09E5.11 | |||||||
| Corresponding_CDS_history | F09E5.11:wp151 | ||||||||
| Corresponding_transcript | F09E5.11.1 | ||||||||
| Other_sequence (31) | |||||||||
| Associated_feature | WBsf650056 | ||||||||
| WBsf650057 | |||||||||
| WBsf650058 | |||||||||
| WBsf665526 | |||||||||
| WBsf223034 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00044121 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00061675 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00044122 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00106135 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00105966 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00008618 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00025042 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00030709 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00106067 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1024681 | ||||||||
| Expr1037429 | |||||||||
| Expr1148088 | |||||||||
| Expr2002343 | |||||||||
| Expr2020561 | |||||||||
| Drives_construct | WBCnstr00027420 | ||||||||
| Construct_product | WBCnstr00027420 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (110) | |||||||||
| Interaction (23) | |||||||||
| Map_info | Positive | Positive_clone | F09E5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | -1.78736 | |||||||
| Reference | WBPaper00036659 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00061547 | |||||||||
| Method | Gene |
