WormBase Tree Display for Gene: WBGene00017208

WBGene00017208 SMap: S_parent: Sequence: F07E5
  Identity: Version: 2
    Name: CGC_name: fbxb-35 Person_evidence: WBPerson655
      Sequence_name: F07E5.2
      Molecular_name: F07E5.2
        F07E5.2.1
        CE09215
      Other_name: CELE_F07E5.2 Accession_evidence: NDB BX284602
      Public_name: fbxb-35
    DB_info: Database: AceView gene 2C343
        WormQTL gene WBGene00017208
        WormFlux gene WBGene00017208
        NDB locus_tag CELE_F07E5.2
        Panther gene CAEEL|WormBase=WBGene00017208|UniProtKB=P91222
          family PTHR22899
        NCBI gene 173563
        RefSeq protein NM_061766.7
        TREEFAM TREEFAM_ID TF343853
        TrEMBL UniProtAcc P91222
        UniProt_GCRP UniProtAcc P91222
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:58 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 12 Dec 2005 17:22:20 WBPerson2970 Name_change: CGC_name: fbxb-35
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: fbxb
    Allele (130)
    RNASeq_FPKM (74)
    Ortholog (26)
    Paralog (148)
    Structured_description: Concise_description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; its encoded protein also contains a Pfam-B45 motif of presently unknown function. Paper_evidence: WBPaper00012854
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Enriched in several structures, including ABalaaaarl; ABalaaaarr; ABalppappa; ABalpppappp; and amphid neurons based on single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and eat-2 based on microarray; tiling array; and RNA-seq studies. Is affected by twelve chemicals including methylmercuric chloride; Psoralens; and allantoin based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: F-box domain; F-box associated; and F-box associated domain, type 2. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F07E5.2
    Corresponding_transcript: F07E5.2.1
    Associated_feature: WBsf643997
      WBsf657190
      WBsf220899
  Experimental_info: RNAi_result: WBRNAi00012830 Inferred_automatically: RNAi_primary
      WBRNAi00030607 Inferred_automatically: RNAi_primary
      WBRNAi00043908 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1012142
      Expr1037393
      Expr1147882
      Expr2011635
      Expr2029874
    Microarray_results (15)
    Expression_cluster (111)
    Interaction (175)
  Map_info: Map: II Position: -13.9197 Error: 0.004322
    Positive: Positive_clone: F07E5 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00012854
    WBPaper00038341
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene