WormBase Tree Display for Gene: WBGene00017207
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WBGene00017207 | SMap | S_parent | Sequence | F07E5 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||
Name | CGC_name | fbxb-6 | Person_evidence | WBPerson655 | |||
Sequence_name | F07E5.1 | ||||||
Molecular_name | F07E5.1 | ||||||
F07E5.1.1 | |||||||
CE53803 | |||||||
Other_name | CELE_F07E5.1 | Accession_evidence | NDB | BX284602 | |||
Public_name | fbxb-6 | ||||||
DB_info | Database | AceView | gene | 2C357 | |||
WormQTL | gene | WBGene00017207 | |||||
WormFlux | gene | WBGene00017207 | |||||
NDB | locus_tag | CELE_F07E5.1 | |||||
Panther | gene | CAEEL|WormBase=WBGene00017207|UniProtKB=P91225 | |||||
family | PTHR22899 | ||||||
NCBI | gene | 184141 | |||||
RefSeq | protein | NM_001377709.1 | |||||
TREEFAM | TREEFAM_ID | TF322871 | |||||
TrEMBL | UniProtAcc | P91225 | |||||
UniProt_GCRP | UniProtAcc | P91225 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (3) | ||||||
Split_into | WBGene00219315 | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | fbxb | ||||||
Allele (112) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog | WBGene00087503 | Caenorhabditis briggsae | From_analysis | Inparanoid_8 | |||
chrII_pilon.g3573 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Paralog (142) | |||||||
Structured_description | Automated_description | Enriched in XXX cell; germ line; and rectal epithelial cell based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-2; eat-2; and sir-2.1 based on microarray and RNA-seq studies. Is affected by eight chemicals including Psoralens; allantoin; and Sirolimus based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: F-box associated and F-box associated domain, type 2. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F07E5.1 | |||||
Corresponding_CDS_history | F07E5.1:wp229 | ||||||
F07E5.1:wp274 | |||||||
Corresponding_transcript | F07E5.1.1 | ||||||
Associated_feature | WBsf657378 | ||||||
WBsf657379 | |||||||
WBsf657380 | |||||||
WBsf986870 | |||||||
Experimental_info | RNAi_result | WBRNAi00012829 | Inferred_automatically | RNAi_primary | |||
WBRNAi00043907 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1023265 | ||||||
Expr1037392 | |||||||
Expr1147880 | |||||||
Expr2011671 | |||||||
Expr2029910 | |||||||
Microarray_results | SMD_F07E5.1 | ||||||
180197_at | |||||||
Aff_F07E5.1 | |||||||
GPL19516_CGZ0014696 | |||||||
GPL21109_F07E5.1 | |||||||
GPL8673_F07E5_1P00456 | |||||||
Expression_cluster (85) | |||||||
Interaction (55) | |||||||
Map_info | Map | II | Position | -13.896 | Error | 0.004791 | |
Positive | Positive_clone | F07E5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00012854 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |