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WormBase Tree Display for Gene: WBGene00017160

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Name Class

WBGene00017160SMapS_parentSequenceF01F1
IdentityVersion1
NameSequence_nameF01F1.3
Molecular_nameF01F1.3
F01F1.3.1
CE29250
F01F1.3.2
Other_nameCELE_F01F1.3Accession_evidenceNDBBX284603
Public_nameF01F1.3
DB_infoDatabaseAceViewgene3G963
WormQTLgeneWBGene00017160
WormFluxgeneWBGene00017160
NDBlocus_tagCELE_F01F1.3
NCBIgene175826
RefSeqproteinNM_001382885.1
TREEFAMTREEFAM_IDTF321416
TrEMBLUniProtAccQ19091
UniProt_GCRPUniProtAccQ19091
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:58WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (37)
RNASeq_FPKM (74)
OrthologWBGene00191518Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00030728Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00055564Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00129104Caenorhabditis japonicaFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00206985Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00223390Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g5061Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g10255Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g5037Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g14022Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g3215Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g24070Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g12863Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g11845Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g1466Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g21830Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00401.g10332Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-F01F1.3Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold546.g3480Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_02617.g27252Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_19838Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_010648Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g03587Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g21958Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_30141800Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrIII_pilon.g7813Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00244653Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00275205Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00262904Strongyloides rattiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionEnriched in GABAergic neurons; germ line; head mesodermal cell; intestine; and muscle cell based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-12; and rrf-3 based on microarray; tiling array; and RNA-seq studies. Is affected by twelve chemicals including rotenone; Alovudine; and stavudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Armadillo-type fold.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF01F1.3
Corresponding_transcriptF01F1.3.1
F01F1.3.2
Other_sequenceCBC09736_1
JI459320.1
Acan_isotig13830
Dviv_isotig29796
NAC00496_1
NB08960
BG467754.1
Associated_featureWBsf659002
WBsf659003
WBsf225013
Experimental_infoRNAi_resultWBRNAi00030540Inferred_automaticallyRNAi_primary
WBRNAi00043753Inferred_automaticallyRNAi_primary
WBRNAi00005808Inferred_automaticallyRNAi_primary
WBRNAi00043754Inferred_automaticallyRNAi_primary
WBRNAi00006733Inferred_automaticallyRNAi_primary
WBRNAi00043752Inferred_automaticallyRNAi_primary
WBRNAi00005920Inferred_automaticallyRNAi_primary
Expr_patternExpr1020129
Expr1147733
Expr2002197
Expr2020418
Drives_constructWBCnstr00027522
Construct_productWBCnstr00027522
Microarray_resultsSMD_5F01F1.3
SMD_F01F1.12
SMD_F01F1.3
181962_at
A_12_P119666
Aff_F01F1.3
GPL13394_WBGene00017160
GPL13914_F01F1.3
GPL14144_F01F1.3_208-267_0.900_10_C
GPL14144_F01F1.3_386-445_0.943_4_A
GPL14144_F01F1.3_5-64_0.904_8_B
GPL19516_CGZ0014340
GPL21109_F01F1.3
GPL3518_CE29250
GPL8304_CE_WBGene00017160_A
GPL8304_CE_WBGene00017160_B
GPL8673_F01F1_3P00059
GPL8673_F01F1_3P00427
GPL8673_F01F1_3P00551
GPL9450_F01F1.3
cea2.p.60825
Expression_cluster (128)
Interaction (64)
Map_infoPositivePositive_cloneF01F1Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIII-1.43802
MethodGene