WormBase Tree Display for Gene: WBGene00017131
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| WBGene00017131 | SMap | S_parent | Sequence | E04F6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | E04F6.15 | |||||||
| Molecular_name | E04F6.15 | ||||||||
| E04F6.15.1 | |||||||||
| CE27908 | |||||||||
| Other_name | CELE_E04F6.15 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | E04F6.15 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (26) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00088544 | ||||||||
| Ortholog (34) | |||||||||
| Paralog (11) | |||||||||
| Structured_description | Automated_description | Enriched in intestine based on tiling array; RNA-seq; and microarray studies. Is affected by several genes including daf-2; skn-1; and hsf-1 based on microarray and RNA-seq studies. Is affected by sixteen chemicals including 1-methylnicotinamide; methylmercuric chloride; and Mercuric Chloride based on RNA-seq and microarray studies. Human ortholog(s) of this gene implicated in autosomal recessive spinocerebellar ataxia 12; developmental and epileptic encephalopathy 28; and esophagus squamous cell carcinoma. Human WWOX enables enzyme binding activity and identical protein binding activity. Is predicted to encode a protein with the following domains: Short-chain dehydrogenase/reductase SDR; short chain dehydrogenase; and NAD(P)-binding domain superfamily. Is an ortholog of human WWOX (WW domain containing oxidoreductase). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:3748 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12799) | ||||
| DOID:5041 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12799) | ||||||
| DOID:0080452 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12799) | ||||||
| DOID:0080060 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12799) | ||||||
| DOID:1749 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12799) | ||||||
| Molecular_info | Corresponding_CDS | E04F6.15 | |||||||
| Corresponding_transcript | E04F6.15.1 | ||||||||
| Other_sequence | Name_isotig03722 | ||||||||
| CSC00044_1 | |||||||||
| EX563461.1 | |||||||||
| FD517749.1 | |||||||||
| Acan_isotig16988 | |||||||||
| Associated_feature | WBsf223311 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00043679 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00043680 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1012120 | ||||||||
| Expr1147664 | |||||||||
| Expr2020379 | |||||||||
| Drives_construct | WBCnstr00027546 | ||||||||
| Construct_product | WBCnstr00027546 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (163) | |||||||||
| Interaction | WBInteraction000047022 | ||||||||
| WBInteraction000047030 | |||||||||
| WBInteraction000047031 | |||||||||
| Map_info | Positive | Positive_clone | E04F6 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | 0.499478 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00065331 | |||||||||
| Method | Gene |
