WormBase Tree Display for Gene: WBGene00017120
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| WBGene00017120 | SMap | S_parent | Sequence | E04A4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | tctn-1 | Person_evidence | WBPerson1657 | |||||
| WBPerson14462 | |||||||||
| WBPerson14460 | |||||||||
| Sequence_name | E04A4.6 | ||||||||
| Molecular_name | E04A4.6 | ||||||||
| E04A4.6.1 | |||||||||
| CE46218 | |||||||||
| Other_name | CELE_E04A4.6 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | tctn-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 08 Dec 2011 14:44:24 | WBPerson2970 | Name_change | CGC_name | tctn-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | tctn | ||||||||
| Allele (18) | |||||||||
| Strain | WBStrain00032915 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00032516 | ||||||||
| 00032517 | |||||||||
| 00032518 | |||||||||
| 00032519 | |||||||||
| Contained_in_operon | CEOP4148 | ||||||||
| Ortholog (24) | |||||||||
| Structured_description | Automated_description | Predicted to be involved in cilium assembly. Predicted to be located in ciliary transition zone. Human ortholog(s) of this gene implicated in Joubert syndrome 13; Joubert syndrome 18; and orofaciodigital syndrome IV. Is an ortholog of human TCTN1 (tectonic family member 1) and TCTN3 (tectonic family member 3). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0110987 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:24519) | ||||
| DOID:0110982 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:26113) | ||||||
| DOID:0060374 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:24519) | ||||||
| Molecular_info | Corresponding_CDS | E04A4.6 | |||||||
| Corresponding_CDS_history | E04A4.6:wp227 | ||||||||
| Corresponding_transcript | E04A4.6.1 | ||||||||
| Other_sequence | ACC09020_1 | ||||||||
| EY461619.1 | |||||||||
| Associated_feature | WBsf651774 | ||||||||
| WBsf667904 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00012682 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00043666 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr12582 | ||||||||
| Expr1013020 | |||||||||
| Expr1037353 | |||||||||
| Expr1147650 | |||||||||
| Expr2017365 | |||||||||
| Expr2035502 | |||||||||
| Construct_product | WBCnstr00022310 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (130) | |||||||||
| Interaction | WBInteraction000317863 | ||||||||
| WBInteraction000390963 | |||||||||
| Map_info | Map | IV | Position | 0.770768 | |||||
| Positive | Positive_clone | E04A4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00048761 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
