WormBase Tree Display for Gene: WBGene00017116

WBGene00017116 SMap: S_parent: Sequence: E04A4
  Identity: Version: 2
    Name: CGC_name: fbxb-78 Person_evidence: WBPerson655
      Sequence_name: E04A4.1
      Molecular_name: E04A4.1
        E04A4.1.1
        CE32346
      Other_name: CELE_E04A4.1 Accession_evidence: NDB BX284604
      Public_name: fbxb-78
    DB_info: Database: AceView gene 4F501
        WormQTL gene WBGene00017116
        WormFlux gene WBGene00017116
        NDB locus_tag CELE_E04A4.1
        Panther gene CAEEL|WormBase=WBGene00017116|UniProtKB=O44475
          family PTHR22899
        NCBI gene 184032
        RefSeq protein NM_068224.5
        TrEMBL UniProtAcc O44475
        UniProt_GCRP UniProtAcc O44475
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:58 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 12 Dec 2005 17:22:20 WBPerson2970 Name_change: CGC_name: fbxb-78
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: fbxb
    Allele (23)
    RNASeq_FPKM (74)
    Ortholog (34)
    Paralog (144)
    Structured_description: Concise_description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; its encoded protein also contains a Pfam-B45 motif of presently unknown function. Paper_evidence: WBPaper00012854
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Enriched in several structures, including ABalaaaala; ABalaapaaa; DB neuron; neurons; and rect_D based on tiling array and single-cell RNA-seq studies. Is affected by several genes including daf-2; eat-2; and sir-2.1 based on tiling array; microarray; and RNA-seq studies. Is affected by eleven chemicals including 1-methylnicotinamide; methylmercuric chloride; and multi-walled carbon nanotube based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: F-box associated and F-box associated domain, type 2. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: E04A4.1
    Corresponding_CDS_history: E04A4.1:wp88
    Corresponding_transcript: E04A4.1.1
    Associated_feature: WBsf645948
      WBsf996384
      WBsf1017310
  Experimental_info: RNAi_result: WBRNAi00012679 Inferred_automatically: RNAi_primary
      WBRNAi00043661 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1019097
      Expr1037350
      Expr1147645
      Expr2011679
      Expr2029918
    Drives_construct: WBCnstr00027558
    Construct_product: WBCnstr00027558
    Microarray_results (15)
    Expression_cluster (135)
    Interaction (25)
  Map_info: Map: IV Position: 0.723969 Error: 0.007315
    Positive: Positive_clone: E04A4 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00012854
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene