WormBase Tree Display for Gene: WBGene00017110
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WBGene00017110 | SMap | S_parent | Sequence | E03H12 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | clec-176 | Person_evidence | WBPerson2531 | |||||
Sequence_name | E03H12.3 | ||||||||
Molecular_name | E03H12.3 | ||||||||
E03H12.3.1 | |||||||||
CE09142 | |||||||||
Other_name | CELE_E03H12.3 | Accession_evidence | NDB | BX284604 | |||||
Public_name | clec-176 | ||||||||
DB_info | Database | AceView | gene | 4F749 | |||||
WormQTL | gene | WBGene00017110 | |||||||
WormFlux | gene | WBGene00017110 | |||||||
NDB | locus_tag | CELE_E03H12.3 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00017110|UniProtKB=O02127 | |||||||
family | PTHR47629 | ||||||||
NCBI | gene | 184028 | |||||||
RefSeq | protein | NM_068291.1 | |||||||
TREEFAM | TREEFAM_ID | TF352198 | |||||||
TrEMBL | UniProtAcc | O02127 | |||||||
UniProt_GCRP | UniProtAcc | O02127 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 09 Oct 2007 15:40:27 | WBPerson2970 | Name_change | CGC_name | clec-176 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | clec | ||||||||
Allele (15) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00026615 | ||||||||
Ortholog (16) | |||||||||
Paralog | WBGene00017109 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | |||||
WormBase-Compara | |||||||||
WBGene00017111 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
Structured_description | Automated_description | Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | E03H12.3 | |||||||
Corresponding_transcript | E03H12.3.1 | ||||||||
Experimental_info | RNAi_result | WBRNAi00012672 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00043643 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1147628 | ||||||||
Drives_construct | WBCnstr00027563 | ||||||||
Construct_product | WBCnstr00027563 | ||||||||
Microarray_results (14) | |||||||||
Expression_cluster (20) | |||||||||
SAGE_tag | SAGE:cttaaggccg | Strand | Antisense | ||||||
SAGE:ctcgctttcg | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
SAGE:tttttttcgt | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
Interaction (88) | |||||||||
Map_info | Map | IV | Position | 1.39592 | Error | 0.000328 | |||
Positive | Positive_clone | E03H12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |