WormBase Tree Display for Gene: WBGene00017108
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WBGene00017108 | SMap | S_parent | Sequence | E03E2 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | cyp-43A1 | |||||||
Sequence_name | E03E2.1 | ||||||||
Molecular_name | E03E2.1 | ||||||||
E03E2.1.1 | |||||||||
CE47225 | |||||||||
Other_name | CELE_E03E2.1 | Accession_evidence | NDB | BX284606 | |||||
Public_name | cyp-43A1 | ||||||||
DB_info | Database | AceView | gene | XG335 | |||||
WormQTL | gene | WBGene00017108 | |||||||
WormFlux | gene | WBGene00017108 | |||||||
NDB | locus_tag | CELE_E03E2.1 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00017108|UniProtKB=O17329 | |||||||
family | PTHR24292 | ||||||||
NCBI | gene | 180838 | |||||||
RefSeq | protein | NM_076560.12 | |||||||
TREEFAM | TREEFAM_ID | TF352036 | |||||||
TrEMBL | UniProtAcc | O17329 | |||||||
UniProt_GCRP | UniProtAcc | O17329 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 21 Sep 2004 09:38:16 | WBPerson1971 | Name_change | CGC_name | cyp-43A1 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | cyp | ||||||||
Allele (30) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00029636 | ||||||||
00029637 | |||||||||
00029638 | |||||||||
00122575 | |||||||||
00122576 | |||||||||
00122577 | |||||||||
00122578 | |||||||||
Ortholog (25) | |||||||||
Paralog | WBGene00007963 | Caenorhabditis elegans | From_analysis | Panther | |||||
WormBase-Compara | |||||||||
WBGene00007964 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00007967 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00014697 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00019438 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00000375 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Predicted to enable heme binding activity; iron ion binding activity; and oxidoreductase activity. Predicted to be located in endoplasmic reticulum membrane. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | E03E2.1 | |||||||
Corresponding_CDS_history | E03E2.1:wp230 | ||||||||
Corresponding_transcript | E03E2.1.1 | ||||||||
Other_sequence (12) | |||||||||
Associated_feature | WBsf648145 | ||||||||
WBsf648146 | |||||||||
WBsf662813 | |||||||||
WBsf662814 | |||||||||
WBsf718592 | |||||||||
Experimental_info | RNAi_result | WBRNAi00030483 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00043634 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00092695 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00012665 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1027595 | ||||||||
Expr1037349 | |||||||||
Expr1147620 | |||||||||
Expr2010746 | |||||||||
Expr2028982 | |||||||||
Drives_construct | WBCnstr00027565 | ||||||||
Construct_product | WBCnstr00027565 | ||||||||
Microarray_results | SMD_E03E2.1 | ||||||||
189413_at | |||||||||
A_12_P104132 | |||||||||
A_12_P159291 | |||||||||
Aff_E03E2.1 | |||||||||
GPL13394_WBGene00017108 | |||||||||
GPL13914_E03E2.1 | |||||||||
GPL14144_E03E2.1_1345-1404_0.937_6_C | |||||||||
GPL14144_E03E2.1_1415-1474_0.953_2_B | |||||||||
GPL14144_E03E2.1_1465-1524_0.964_1_A | |||||||||
GPL19516_CGZ0014129 | |||||||||
GPL19516_CGZ0014130 | |||||||||
GPL19516_CGZ0014131 | |||||||||
GPL21109_E03E2.1.1 | |||||||||
GPL3518_CE29747 | |||||||||
GPL8304_CE_WBGene00017108_A | |||||||||
GPL8304_CE_WBGene00017108_C | |||||||||
GPL8673_E03E2_1P00345 | |||||||||
GPL8673_E03E2_1P00868 | |||||||||
GPL9450_E03E2.1 | |||||||||
cea2.p.138833 | |||||||||
Expression_cluster (133) | |||||||||
Interaction | WBInteraction000127035 | ||||||||
WBInteraction000146234 | |||||||||
WBInteraction000341229 | |||||||||
WBInteraction000341230 | |||||||||
WBInteraction000409883 | |||||||||
WBInteraction000430080 | |||||||||
WBInteraction000504132 | |||||||||
Map_info | Map | X | Position | -4.38975 | |||||
Positive | Positive_clone | E03E2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00055090 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |