WormBase Tree Display for Gene: WBGene00017072
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| WBGene00017072 | SMap | S_parent | Sequence | D2096 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | D2096.5 | |||||||
| Molecular_name | D2096.5 | ||||||||
| D2096.5.1 | |||||||||
| CE35265 | |||||||||
| Other_name | CELE_D2096.5 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | D2096.5 | ||||||||
| DB_info | Database | AceView | gene | 4J124 | |||||
| WormQTL | gene | WBGene00017072 | |||||||
| WormFlux | gene | WBGene00017072 | |||||||
| NDB | locus_tag | CELE_D2096.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00017072|UniProtKB=Q19002 | |||||||
| family | PTHR21479 | ||||||||
| NCBI | gene | 183966 | |||||||
| RefSeq | protein | NM_069016.4 | |||||||
| TREEFAM | TREEFAM_ID | TF352284 | |||||||
| TrEMBL | UniProtAcc | Q19002 | |||||||
| UniProt_GCRP | UniProtAcc | Q19002 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (15) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (11) | |||||||||
| Paralog (37) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABarpapaaa; ABplaaaaaa; ABplpaaapa; germ line; and neurons based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; rrf-3; and eat-2 based on microarray and RNA-seq studies. Is affected by six chemicals including Zidovudine; Psoralens; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Protein of unknown function DUF870, Caenorhabditis species; Transthyretin-like superfamily; and Caenorhabditis elegans protein of unknown function (DUF870). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | D2096.5 | |||||||
| Corresponding_CDS_history | D2096.5:wp105 | ||||||||
| Corresponding_transcript | D2096.5.1 | ||||||||
| Associated_feature | WBsf230413 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00043529 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00030432 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00012608 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00112581 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1010199 | ||||||||
| Expr1147524 | |||||||||
| Expr2002103 | |||||||||
| Expr2020328 | |||||||||
| Drives_construct | WBCnstr00027590 | ||||||||
| Construct_product | WBCnstr00027590 | ||||||||
| Microarray_results (12) | |||||||||
| Expression_cluster (108) | |||||||||
| Interaction | WBInteraction000187817 | ||||||||
| WBInteraction000200650 | |||||||||
| WBInteraction000277564 | |||||||||
| WBInteraction000283422 | |||||||||
| WBInteraction000331972 | |||||||||
| WBInteraction000357532 | |||||||||
| WBInteraction000409103 | |||||||||
| WBInteraction000459499 | |||||||||
| Map_info | Positive | Positive_clone | D2096 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 3.71333 | |||||||
| Method | Gene |
