WormBase Tree Display for Gene: WBGene00017070
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WBGene00017070 | SMap | S_parent | Sequence | D2096 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | praf-3 | Person_evidence | WBPerson7269 | |||
Sequence_name | D2096.2 | ||||||
Molecular_name | D2096.2a | ||||||
D2096.2a.1 | |||||||
CE29245 | |||||||
D2096.2b | |||||||
CE38496 | |||||||
D2096.2b.1 | |||||||
D2096.2b.2 | |||||||
D2096.2b.3 | |||||||
D2096.2b.4 | |||||||
Other_name | CELE_D2096.2 | Accession_evidence | NDB | BX284604 | |||
Public_name | praf-3 | ||||||
DB_info | Database | WormQTL | gene | WBGene00017070 | |||
WormFlux | gene | WBGene00017070 | |||||
NDB | locus_tag | CELE_D2096.2 | |||||
Panther | gene | CAEEL|WormBase=WBGene00017070|UniProtKB=H2KZJ7 | |||||
family | PTHR12859 | ||||||
NCBI | gene | 177637 | |||||
RefSeq | protein | NM_001027933.4 | |||||
NM_001383143.1 | |||||||
TREEFAM | TREEFAM_ID | TF105479 | |||||
TrEMBL | UniProtAcc | Q4TTA9 | |||||
H2KZJ7 | |||||||
UniProt_GCRP | UniProtAcc | H2KZJ7 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | praf | ||||||
Allele (34) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00022345 | ||||||
00022346 | |||||||
00022347 | |||||||
00022348 | |||||||
00022349 | |||||||
Ortholog (39) | |||||||
Structured_description | Automated_description | Predicted to be located in membrane. Is an ortholog of human ARL6IP5 (ADP ribosylation factor like GTPase 6 interacting protein 5) and PRAF2 (PRA1 domain family member 2). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | D2096.2a | |||||
D2096.2b | |||||||
Corresponding_CDS_history | D2096.2:wp142 | ||||||
Corresponding_transcript | D2096.2a.1 | ||||||
D2096.2b.1 | |||||||
D2096.2b.2 | |||||||
D2096.2b.3 | |||||||
D2096.2b.4 | |||||||
Other_sequence (14) | |||||||
Associated_feature | WBsf646161 | ||||||
WBsf646162 | |||||||
WBsf660400 | |||||||
WBsf660401 | |||||||
WBsf660402 | |||||||
WBsf977192 | |||||||
WBsf977193 | |||||||
WBsf977194 | |||||||
WBsf228673 | |||||||
Experimental_info | RNAi_result | WBRNAi00024967 | Inferred_automatically | RNAi_primary | |||
WBRNAi00103240 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00027251 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00012605 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00030430 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00043527 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00012611 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00103241 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00024968 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00043535 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1016988 | ||||||
Expr1037335 | |||||||
Expr1147521 | |||||||
Expr2015085 | |||||||
Expr2033322 | |||||||
Drives_construct | WBCnstr00027592 | ||||||
Construct_product | WBCnstr00027592 | ||||||
Microarray_results (29) | |||||||
Expression_cluster (109) | |||||||
Interaction (15) | |||||||
Map_info | Map | IV | Position | 3.74406 | Error | 0.00428 | |
Positive | Positive_clone | D2096 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00038491 | ||||||
WBPaper00055090 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |