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WormBase Tree Display for Gene: WBGene00017016

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Name Class

WBGene00017016SMapS_parentSequenceD1014
IdentityVersion3
NameCGC_namesnap-1Person_evidenceWBPerson451
Sequence_nameD1014.3
Molecular_nameD1014.3a
D1014.3a.1
CE38494
D1014.3b
CE53052
D1014.3b.1
D1014.3b.2
D1014.3b.3
Other_namephi-29Person_evidenceWBPerson2582
CELE_D1014.3Accession_evidenceNDBBX284605
Public_namesnap-1
DB_infoDatabaseAceViewgene5I613
WormQTLgeneWBGene00017016
WormFluxgeneWBGene00017016
NDBlocus_tagCELE_D1014.3
PanthergeneCAEEL|WormBase=WBGene00017016|UniProtKB=Q18921
familyPTHR13768
NCBIgene179193
RefSeqproteinNM_001392555.1
NM_072698.7
TrEMBLUniProtAccA0A486WXT8
Q18921
UniProt_GCRPUniProtAccQ18921
OMIMgene611270
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:58WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
217 Mar 2005 13:54:35WBPerson2970Name_changeOther_namephi-29
307 Sep 2006 08:05:50WBPerson2970Name_changeCGC_namesnap-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsnap
Allele (39)
RNASeq_FPKM (74)
GO_annotation (12)
Contained_in_operonCEOP5180
Ortholog (48)
ParalogWBGene00013345Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00044794Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable soluble NSF attachment protein activity and syntaxin binding activity. Involved in IRE1-mediated unfolded protein response. Predicted to be located in membrane. Predicted to be part of SNARE complex. Human ortholog(s) of this gene implicated in Alzheimer's disease; Down syndrome; and developmental and epileptic encephalopathy 107. Is an ortholog of human NAPA (NSF attachment protein alpha) and NAPB (NSF attachment protein beta).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:0070393Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:15751)
DOID:10652Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:15751)
DOID:14250Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:15751)
Molecular_infoCorresponding_CDSD1014.3a
D1014.3b
Corresponding_CDS_historyD1014.3:wp142
Corresponding_transcriptD1014.3a.1
D1014.3b.1
D1014.3b.2
D1014.3b.3
Other_sequence (35)
Associated_featureWBsf646987
WBsf646988
WBsf661465
WBsf661466
WBsf981966
WBsf1000585
WBsf232064
WBsf232065
Experimental_infoRNAi_result (32)
Expr_patternExpr5609
Expr1016527
Expr1037312
Expr1147322
Expr2015937
Expr2034170
Drives_constructWBCnstr00004056
WBCnstr00027636
Construct_productWBCnstr00027636
Microarray_results (21)
Expression_cluster (101)
InteractionWBInteraction000032751
WBInteraction000033299
WBInteraction000035135
WBInteraction000035710
WBInteraction000036066
WBInteraction000036554
WBInteraction000036681
WBInteraction000037649
WBInteraction000038028
WBInteraction000038029
WBInteraction000038307
WBInteraction000038385
WBInteraction000038759
WBInteraction000038761
WBInteraction000038763
WBInteraction000039186
WBInteraction000039751
WBInteraction000039769
WBInteraction000040925
WBInteraction000042131
WBInteraction000042132
WBInteraction000043754
WBInteraction000043886
WBInteraction000043906
WBInteraction000048031
WBInteraction000050206
WBInteraction000050502
WBInteraction000104682
WBInteraction000110985
WBInteraction000112942
WBInteraction000117859
WBInteraction000118781
WBInteraction000124466
WBInteraction000124526
WBInteraction000133491
WBInteraction000136565
WBInteraction000136786
WBInteraction000143773
WBInteraction000145520
WBInteraction000149403
WBInteraction000150159
WBInteraction000151094
WBInteraction000159712
WBInteraction000161156
WBInteraction000165215
WBInteraction000167707
WBInteraction000170049
WBInteraction000170050
WBInteraction000171672
WBInteraction000185793
WBInteraction000187000
WBInteraction000209165
WBInteraction000250245
WBInteraction000255975
WBInteraction000255978
WBInteraction000264291
WBInteraction000267020
WBInteraction000274424
WBInteraction000291716
WBInteraction000296222
WBInteraction000296223
WBInteraction000300733
WBInteraction000321867
WBInteraction000327498
WBInteraction000338036
WBInteraction000338288
WBInteraction000339405
WBInteraction000346717
WBInteraction000355830
WBInteraction000388298
WBInteraction000389684
WBInteraction000395533
WBInteraction000414120
WBInteraction000428199
WBInteraction000456500
WBInteraction000457211
WBInteraction000467863
WBInteraction000536886
WBInteraction000536940
WBInteraction000536971
WBInteraction000536991
WBInteraction000537045
WBInteraction000559152
WBInteraction000564280
WBInteraction000578647
Map_infoMapVPosition1.04508Error0.011611
PositivePositive_cloneD1014Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00038491
WBPaper00055090
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene