WormBase Tree Display for Gene: WBGene00017005
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WBGene00017005 | SMap | S_parent | Sequence | D1007 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | D1007.8 | |||||||
Molecular_name | D1007.8 | ||||||||
D1007.8.1 | |||||||||
CE36119 | |||||||||
Other_name | CELE_D1007.8 | Accession_evidence | NDB | BX284601 | |||||
Public_name | D1007.8 | ||||||||
DB_info | Database | AceView | gene | 1F173 | |||||
WormQTL | gene | WBGene00017005 | |||||||
WormFlux | gene | WBGene00017005 | |||||||
NDB | locus_tag | CELE_D1007.8 | |||||||
NCBI | gene | 172066 | |||||||
RefSeq | protein | NM_059004.6 | |||||||
TREEFAM | TREEFAM_ID | TF336090 | |||||||
TrEMBL | UniProtAcc | Q9TXQ8 | |||||||
UniProt_GCRP | UniProtAcc | Q9TXQ8 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (25) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00097205 | ||||||||
00097206 | |||||||||
00097207 | |||||||||
00097208 | |||||||||
00097209 | |||||||||
00097210 | |||||||||
00097211 | |||||||||
00097212 | |||||||||
Contained_in_operon | CEOP1192 | ||||||||
Ortholog (25) | |||||||||
Paralog | WBGene00019158 | ||||||||
Structured_description | Automated_description | Predicted to enable single-stranded DNA binding activity and telomeric DNA binding activity. Predicted to be involved in DNA replication; double-strand break repair via homologous recombination; and nucleotide-excision repair. Predicted to be located in chromosome, telomeric region and site of double-strand break. Predicted to be part of DNA replication factor A complex. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | D1007.8 | |||||||
Corresponding_CDS_history | D1007.8:wp112 | ||||||||
Corresponding_transcript | D1007.8.1 | ||||||||
Other_sequence | EX553060.1 | ||||||||
CR10844 | |||||||||
CR01954 | |||||||||
CRC02552_1 | |||||||||
Associated_feature | WBsf217548 | ||||||||
Experimental_info | RNAi_result | WBRNAi00062179 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00085112 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00030313 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00003264 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00007405 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00061768 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00043333 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1020942 | ||||||||
Expr1037305 | |||||||||
Expr1147313 | |||||||||
Expr2002007 | |||||||||
Expr2020231 | |||||||||
Microarray_results | SMD_D1007.8 | ||||||||
SMD_D1007.8:2 | |||||||||
182729_at | |||||||||
A_12_P111802 | |||||||||
Aff_D1007.8 | |||||||||
GPL13394_WBGene00017005 | |||||||||
GPL13914_D1007.8 | |||||||||
GPL14144_D1007.8_12-71_0.876_34_C | |||||||||
GPL14144_D1007.8_456-515_0.914_15_B | |||||||||
GPL14144_D1007.8_540-599_0.935_9_A | |||||||||
GPL19516_CGZ0013487 | |||||||||
GPL21109_D1007.8 | |||||||||
GPL3518_CE23618 | |||||||||
GPL8304_CE_WBGene00017005_A | |||||||||
GPL8304_CE_WBGene00017005_B | |||||||||
GPL8673_D1007_8P00001 | |||||||||
GPL8673_D1007_8P00400 | |||||||||
GPL8673_D1007_8P00681 | |||||||||
GPL9450_D1007.8 | |||||||||
cea2.p.05754 | |||||||||
Expression_cluster (97) | |||||||||
SAGE_tag | SAGE:ttctggaata | Strand | Antisense | ||||||
SAGE:ccgtcccaatgccgatt | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
SAGE:attactgata | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
SAGE:attactgataaagataa | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
Interaction (44) | |||||||||
Map_info | Positive | Positive_clone | D1007 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | I | -1.0381 | |||||||
Method | Gene |