WormBase Tree Display for Gene: WBGene00016989
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WBGene00016989 | SMap | S_parent | Sequence | CD4 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | mrpl-48 | Person_evidence | WBPerson7169 | |||||
WBPerson117 | |||||||||
Sequence_name | CD4.3 | ||||||||
Molecular_name | CD4.3 | ||||||||
CD4.3.1 | |||||||||
CE16951 | |||||||||
CD4.3.2 | |||||||||
Other_name | CELE_CD4.3 | Accession_evidence | NDB | BX284605 | |||||
Public_name | mrpl-48 | ||||||||
DB_info | Database | AceView | gene | 5G73 | |||||
WormQTL | gene | WBGene00016989 | |||||||
WormFlux | gene | WBGene00016989 | |||||||
NDB | locus_tag | CELE_CD4.3 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00016989|UniProtKB=O44159 | |||||||
family | PTHR13473 | ||||||||
NCBI | gene | 259341 | |||||||
RefSeq | protein | NM_072074.8 | |||||||
TREEFAM | TREEFAM_ID | TF315130 | |||||||
TrEMBL | UniProtAcc | O44159 | |||||||
UniProt_GCRP | UniProtAcc | O44159 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 07 Jun 2018 14:30:09 | WBPerson1983 | Name_change | CGC_name | mrpl-48 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | mrpl | ||||||||
Allele (15) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00032101 | ||||||||
00032102 | |||||||||
00032103 | |||||||||
00122493 | |||||||||
Contained_in_operon | CEOP5076 | ||||||||
Ortholog (32) | |||||||||
Paralog | WBGene00012556 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Structured_description | Automated_description | Predicted to be located in mitochondrial ribosome. Predicted to be part of ribonucleoprotein complex. Is an ortholog of human MRPL48 (mitochondrial ribosomal protein L48). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | CD4.3 | |||||||
Corresponding_transcript | CD4.3.1 | ||||||||
CD4.3.2 | |||||||||
Other_sequence (24) | |||||||||
Associated_feature | WBsf661268 | ||||||||
WBsf231772 | |||||||||
Experimental_info | RNAi_result | WBRNAi00008565 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00043303 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00030293 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00071531 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1011292 | ||||||||
Expr1037295 | |||||||||
Expr1147283 | |||||||||
Expr2001992 | |||||||||
Expr2020216 | |||||||||
Drives_construct | WBCnstr00027653 | ||||||||
Construct_product | WBCnstr00027653 | ||||||||
Microarray_results (20) | |||||||||
Expression_cluster (96) | |||||||||
Interaction (31) | |||||||||
Map_info | Positive | Positive_clone | CD4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | V | -1.36952 | |||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00055090 | |||||||||
WBPaper00061547 | |||||||||
Method | Gene |