WormBase Tree Display for Gene: WBGene00016987
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| WBGene00016987 | SMap | S_parent | Sequence | CC8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | CC8.2 | |||||||
| Molecular_name | CC8.2a | ||||||||
| CC8.2a.1 | |||||||||
| CE23615 | |||||||||
| CC8.2b | |||||||||
| CE20615 | |||||||||
| CC8.2b.1 | |||||||||
| Other_name | CC8.a | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_CC8.2 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | CC8.2 | ||||||||
| DB_info | Database | AceView | gene | 4E410 | |||||
| WormQTL | gene | WBGene00016987 | |||||||
| WormFlux | gene | WBGene00016987 | |||||||
| NDB | locus_tag | CELE_CC8.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016987|UniProtKB=Q966L7 | |||||||
| family | PTHR12307 | ||||||||
| NCBI | gene | 177126 | |||||||
| RefSeq | protein | NM_001392285.1 | |||||||
| NM_067991.6 | |||||||||
| TREEFAM | TREEFAM_ID | TF105537 | |||||||
| TrEMBL | UniProtAcc | H2KZH6 | |||||||
| Q966L7 | |||||||||
| UniProt_GCRP | UniProtAcc | Q966L7 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (42) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00022288 | ||||||||
| 00022289 | |||||||||
| 00022290 | |||||||||
| 00022291 | |||||||||
| 00022292 | |||||||||
| 00022293 | |||||||||
| Ortholog (42) | |||||||||
| Paralog | WBGene00019211 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable glycogen binding activity and protein phosphatase 1 binding activity. Predicted to be involved in regulation of glycogen biosynthetic process. Predicted to be part of protein phosphatase type 1 complex. Is an ortholog of human PPP1R3D (protein phosphatase 1 regulatory subunit 3D). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | CC8.2a | |||||||
| CC8.2b | |||||||||
| Corresponding_transcript | CC8.2a.1 | ||||||||
| CC8.2b.1 | |||||||||
| Other_sequence | CR03056 | ||||||||
| OOC02153_1 | |||||||||
| Tcir_isotig27025 | |||||||||
| CBC08445_1 | |||||||||
| CJC03028_1 | |||||||||
| CRC05325_1 | |||||||||
| Associated_feature (11) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00043300 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00030291 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00012476 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00098197 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00076250 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00012478 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1025659 | ||||||||
| Expr1037294 | |||||||||
| Expr1147278 | |||||||||
| Expr2001988 | |||||||||
| Expr2020212 | |||||||||
| Microarray_results (26) | |||||||||
| Expression_cluster (169) | |||||||||
| Interaction | WBInteraction000033241 | ||||||||
| WBInteraction000033242 | |||||||||
| WBInteraction000035391 | |||||||||
| WBInteraction000038543 | |||||||||
| WBInteraction000048407 | |||||||||
| WBInteraction000123679 | |||||||||
| WBInteraction000123680 | |||||||||
| WBInteraction000123681 | |||||||||
| WBInteraction000123682 | |||||||||
| Map_info | Positive | Positive_clone | CC8 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | -2.86438 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
