WormBase Tree Display for Gene: WBGene00016981

WBGene00016981 SMap: S_parent: Sequence: C56G2
  Identity: Version: 2
    Name: CGC_name: rpn-13 Paper_evidence: WBPaper00042588
          Person_evidence: WBPerson1551
      Sequence_name: C56G2.7
      Molecular_name: C56G2.7a
        C56G2.7a.1
        CE30640
        C56G2.7b
        CE52601
        C56G2.7b.1
      Other_name: CELE_C56G2.7 Accession_evidence: NDB BX284603
      Public_name: rpn-13
    DB_info: Database: AceView gene 3H428
        WormQTL gene WBGene00016981
        WormFlux gene WBGene00016981
        NDB locus_tag CELE_C56G2.7
        Panther gene CAEEL|WormBase=WBGene00016981|UniProtKB=Q09289
          family PTHR12225
        NCBI gene 3565888
        RefSeq protein NM_065986.10
            NM_001361721.4
        SwissProt UniProtAcc Q09289
        TrEMBL UniProtAcc A0A2K5ATW5
        UniProt_GCRP UniProtAcc Q09289
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:58 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 07 Jun 2016 16:25:01 WBPerson2970 Name_change: CGC_name: rpn-13
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: rpn
    Allele (15)
    RNASeq_FPKM (74)
    GO_annotation (14)
    Contained_in_operon: CEOP3870
    Ortholog (45)
    Structured_description: Automated_description: Enables ubiquitin-specific protease binding activity. Predicted to be involved in proteasome assembly. Predicted to be located in cytoplasm and nucleus. Predicted to be part of proteasome regulatory particle, lid subcomplex. Expressed in intestine; neurons; and seam cell. Is an ortholog of human ADRM1 (ADRM1 26S proteasome ubiquitin receptor). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C56G2.7a
      C56G2.7b
    Corresponding_transcript: C56G2.7a.1
      C56G2.7b.1
    Other_sequence (49)
    Associated_feature: WBsf992722
      WBsf226804
  Experimental_info: RNAi_result: WBRNAi00012474 Inferred_automatically: RNAi_primary
      WBRNAi00111098 Inferred_automatically: RNAi_primary
      WBRNAi00062176 Inferred_automatically: RNAi_primary
      WBRNAi00005356 Inferred_automatically: RNAi_primary
      WBRNAi00043290 Inferred_automatically: RNAi_primary
      WBRNAi00033355 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr7487
      Expr1018950
      Expr1037291
      Expr1147268
      Expr2015488
      Expr2033723
    Drives_construct: WBCnstr00012631
      WBCnstr00027659
    Construct_product: WBCnstr00027659
    Microarray_results (19)
    Expression_cluster (112)
    Interaction (118)
  Map_info: Map: III Position: -1.38685
    Positive: Positive_clone: C56G2 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00049828
    WBPaper00055090
    WBPaper00063122
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene