WormBase Tree Display for Gene: WBGene00016962
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| WBGene00016962 | SMap | S_parent | Sequence | C56C10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C56C10.4 | |||||||
| Molecular_name | C56C10.4 | ||||||||
| C56C10.4.1 | |||||||||
| CE02569 | |||||||||
| Other_name | CELE_C56C10.4 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | C56C10.4 | ||||||||
| DB_info | Database | AceView | gene | 2G873 | |||||
| WormQTL | gene | WBGene00016962 | |||||||
| WormFlux | gene | WBGene00016962 | |||||||
| NDB | locus_tag | CELE_C56C10.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016962|UniProtKB=Q18883 | |||||||
| family | PTHR46705 | ||||||||
| NCBI | gene | 174088 | |||||||
| RefSeq | protein | NM_062933.7 | |||||||
| TREEFAM | TREEFAM_ID | TF315483 | |||||||
| TrEMBL | UniProtAcc | Q18883 | |||||||
| UniProt_GCRP | UniProtAcc | Q18883 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (11) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (30) | |||||||||
| Paralog (18) | |||||||||
| Structured_description | Automated_description | Enriched in anterior hypodermis; interfacial epithelial cell; and sensory neurons based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-2; dpy-10; and daf-12 based on tiling array; microarray; and RNA-seq studies. Is affected by eighteen chemicals including methylmercuric chloride; Alovudine; and stavudine based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: DB module and Domain of unknown function DB. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C56C10.4 | |||||||
| Corresponding_transcript | C56C10.4.1 | ||||||||
| Other_sequence (21) | |||||||||
| Associated_feature | WBsf644304 | ||||||||
| WBsf657699 | |||||||||
| WBsf657700 | |||||||||
| WBsf979012 | |||||||||
| WBsf988203 | |||||||||
| WBsf221467 | |||||||||
| WBsf221468 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00012457 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00043265 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00030197 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1011189 | ||||||||
| Expr1037277 | |||||||||
| Expr1147245 | |||||||||
| Expr2001973 | |||||||||
| Expr2020197 | |||||||||
| Drives_construct | WBCnstr00027675 | ||||||||
| Construct_product | WBCnstr00027675 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (185) | |||||||||
| Interaction | WBInteraction000121648 | ||||||||
| WBInteraction000152539 | |||||||||
| WBInteraction000170562 | |||||||||
| WBInteraction000184950 | |||||||||
| WBInteraction000188311 | |||||||||
| WBInteraction000189223 | |||||||||
| WBInteraction000191150 | |||||||||
| WBInteraction000197122 | |||||||||
| WBInteraction000217660 | |||||||||
| WBInteraction000224051 | |||||||||
| WBInteraction000234087 | |||||||||
| WBInteraction000235470 | |||||||||
| WBInteraction000238166 | |||||||||
| WBInteraction000238870 | |||||||||
| WBInteraction000246247 | |||||||||
| WBInteraction000248043 | |||||||||
| WBInteraction000252308 | |||||||||
| WBInteraction000255627 | |||||||||
| WBInteraction000258989 | |||||||||
| WBInteraction000263838 | |||||||||
| WBInteraction000267118 | |||||||||
| WBInteraction000269461 | |||||||||
| WBInteraction000280665 | |||||||||
| WBInteraction000282433 | |||||||||
| WBInteraction000285677 | |||||||||
| WBInteraction000291648 | |||||||||
| WBInteraction000297153 | |||||||||
| WBInteraction000307063 | |||||||||
| WBInteraction000308626 | |||||||||
| WBInteraction000309878 | |||||||||
| WBInteraction000310882 | |||||||||
| WBInteraction000316191 | |||||||||
| WBInteraction000325350 | |||||||||
| WBInteraction000326136 | |||||||||
| WBInteraction000326213 | |||||||||
| WBInteraction000334606 | |||||||||
| WBInteraction000334625 | |||||||||
| WBInteraction000338283 | |||||||||
| WBInteraction000351035 | |||||||||
| WBInteraction000351255 | |||||||||
| WBInteraction000370662 | |||||||||
| WBInteraction000385897 | |||||||||
| WBInteraction000395837 | |||||||||
| WBInteraction000420921 | |||||||||
| WBInteraction000429373 | |||||||||
| WBInteraction000433763 | |||||||||
| WBInteraction000435160 | |||||||||
| WBInteraction000441044 | |||||||||
| WBInteraction000450554 | |||||||||
| Map_info | Positive | Positive_clone | C56C10 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | -0.110224 | |||||||
| Method | Gene |
