WormBase Tree Display for Gene: WBGene00016947
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| WBGene00016947 | SMap | S_parent | Sequence | C55B7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C55B7.11 | |||||||
| Molecular_name | C55B7.11 | ||||||||
| C55B7.11.1 | |||||||||
| CE41882 | |||||||||
| C55B7.11.2 | |||||||||
| Other_name | CELE_C55B7.11 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | C55B7.11 | ||||||||
| DB_info | Database | AceView | gene | 1H88 | |||||
| WormQTL | gene | WBGene00016947 | |||||||
| WormFlux | gene | WBGene00016947 | |||||||
| NDB | locus_tag | CELE_C55B7.11 | |||||||
| NCBI | gene | 183846 | |||||||
| RefSeq | protein | NM_059474.8 | |||||||
| TREEFAM | TREEFAM_ID | TF343470 | |||||||
| TrEMBL | UniProtAcc | Q966M0 | |||||||
| UniProt_GCRP | UniProtAcc | Q966M0 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (23) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (21) | |||||||||
| Paralog | WBGene00020404 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WormBase-Compara | |||||||||
| WBGene00009185 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00015937 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00019972 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in several structures, including ABalapppaa; ABalppppppa; germ line; head mesodermal cell; and lateral ganglion based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; glp-1; and hsf-1 based on microarray and RNA-seq studies. Is affected by eleven chemicals including manganese chloride; metformin; and Sirolimus based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C55B7.11 | |||||||
| Corresponding_CDS_history | C55B7.11:wp185 | ||||||||
| Corresponding_transcript | C55B7.11.1 | ||||||||
| C55B7.11.2 | |||||||||
| Other_sequence | OVC09044_1 | ||||||||
| BF824716.1 | |||||||||
| Associated_feature | WBsf649242 | ||||||||
| WBsf219597 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00043224 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00003238 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00007839 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1022855 | ||||||||
| Expr1037272 | |||||||||
| Expr1147205 | |||||||||
| Expr2001959 | |||||||||
| Expr2020183 | |||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (134) | |||||||||
| Interaction (141) | |||||||||
| Map_info | Positive | Positive_clone | C55B7 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | 1.19029 | |||||||
| Method | Gene |
