WormBase Tree Display for Gene: WBGene00016942
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| WBGene00016942 | SMap | S_parent | Sequence | C55B7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C55B7.3 | |||||||
| Molecular_name | C55B7.3 | ||||||||
| C55B7.3.1 | |||||||||
| CE09014 | |||||||||
| Other_name | CELE_C55B7.3 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | C55B7.3 | ||||||||
| DB_info | Database | AceView | gene | 1H77 | |||||
| WormQTL | gene | WBGene00016942 | |||||||
| WormFlux | gene | WBGene00016942 | |||||||
| NDB | locus_tag | CELE_C55B7.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016942|UniProtKB=Q966M2 | |||||||
| family | PTHR46163 | ||||||||
| NCBI | gene | 172359 | |||||||
| RefSeq | protein | NM_001380558.2 | |||||||
| TREEFAM | TREEFAM_ID | TF316265 | |||||||
| TrEMBL | UniProtAcc | Q966M2 | |||||||
| UniProt_GCRP | UniProtAcc | Q966M2 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (22) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00122444 | ||||||||
| 00122445 | |||||||||
| Contained_in_operon | CEOP1907 | ||||||||
| Ortholog (55) | |||||||||
| Paralog (64) | |||||||||
| Structured_description | Automated_description | Predicted to enable protein tyrosine phosphatase activity. Is an ortholog of human PTPN7 (protein tyrosine phosphatase non-receptor type 7). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C55B7.3 | |||||||
| Corresponding_transcript | C55B7.3.1 | ||||||||
| Other_sequence | JO473658.1 | ||||||||
| Acan_isotig22384 | |||||||||
| CRC01757_1 | |||||||||
| Oden_isotig25641 | |||||||||
| Oden_isotig19702 | |||||||||
| ACC09960_1 | |||||||||
| Dviv_isotig23676 | |||||||||
| JI167886.1 | |||||||||
| Associated_feature | WBsf983948 | ||||||||
| WBsf1009963 | |||||||||
| WBsf217841 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00043227 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00030180 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00003241 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00044323 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00007382 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00003355 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1015947 | ||||||||
| Expr1037268 | |||||||||
| Expr1147208 | |||||||||
| Expr2001960 | |||||||||
| Expr2020184 | |||||||||
| Drives_construct | WBCnstr00027689 | ||||||||
| Construct_product | WBCnstr00027689 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (189) | |||||||||
| Interaction (32) | |||||||||
| Map_info | Positive | Positive_clone | C55B7 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | 1.16773 | |||||||
| Reference | WBPaper00010743 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00062388 | |||||||||
| Method | Gene |
