WormBase Tree Display for Gene: WBGene00016921
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| WBGene00016921 | SMap | S_parent | Sequence | C54F6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C54F6.3 | |||||||
| Molecular_name | C54F6.3 | ||||||||
| C54F6.3.1 | |||||||||
| CE08975 | |||||||||
| Other_name | CELE_C54F6.3 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | C54F6.3 | ||||||||
| DB_info | Database | AceView | gene | 5I11 | |||||
| WormQTL | gene | WBGene00016921 | |||||||
| WormFlux | gene | WBGene00016921 | |||||||
| NDB | locus_tag | CELE_C54F6.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016921|UniProtKB=O16449 | |||||||
| family | PTHR22900 | ||||||||
| NCBI | gene | 183803 | |||||||
| RefSeq | protein | NM_072539.4 | |||||||
| TREEFAM | TREEFAM_ID | TF316032 | |||||||
| TrEMBL | UniProtAcc | O16449 | |||||||
| UniProt_GCRP | UniProtAcc | O16449 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (28) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00122419 | ||||||||
| 00122420 | |||||||||
| 00122421 | |||||||||
| 00122422 | |||||||||
| 00122423 | |||||||||
| Ortholog (41) | |||||||||
| Paralog (27) | |||||||||
| Structured_description | Automated_description | Predicted to enable chondroitin 4-sulfotransferase activity. Predicted to be involved in chondroitin sulfate biosynthetic process and positive regulation of response to oxidative stress. Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C54F6.3 | |||||||
| Corresponding_transcript | C54F6.3.1 | ||||||||
| Other_sequence | FG647756.1 | ||||||||
| Associated_feature | WBsf646944 | ||||||||
| WBsf231992 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00012403 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00030152 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00043165 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1019837 | ||||||||
| Expr1147143 | |||||||||
| Expr2001929 | |||||||||
| Expr2020152 | |||||||||
| Drives_construct | WBCnstr00027705 | ||||||||
| Construct_product | WBCnstr00027705 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (119) | |||||||||
| Interaction | WBInteraction000142427 | ||||||||
| WBInteraction000197373 | |||||||||
| WBInteraction000203215 | |||||||||
| WBInteraction000225246 | |||||||||
| WBInteraction000254535 | |||||||||
| WBInteraction000258631 | |||||||||
| WBInteraction000262395 | |||||||||
| WBInteraction000265313 | |||||||||
| WBInteraction000270010 | |||||||||
| WBInteraction000271859 | |||||||||
| WBInteraction000277601 | |||||||||
| WBInteraction000279233 | |||||||||
| WBInteraction000280737 | |||||||||
| WBInteraction000283590 | |||||||||
| WBInteraction000325889 | |||||||||
| WBInteraction000340464 | |||||||||
| WBInteraction000345925 | |||||||||
| WBInteraction000352076 | |||||||||
| WBInteraction000360288 | |||||||||
| WBInteraction000376065 | |||||||||
| WBInteraction000377692 | |||||||||
| WBInteraction000382854 | |||||||||
| WBInteraction000387664 | |||||||||
| WBInteraction000389155 | |||||||||
| WBInteraction000406893 | |||||||||
| WBInteraction000425269 | |||||||||
| WBInteraction000429903 | |||||||||
| WBInteraction000434314 | |||||||||
| WBInteraction000437352 | |||||||||
| WBInteraction000447489 | |||||||||
| WBInteraction000461794 | |||||||||
| Map_info | Positive | Positive_clone | C54F6 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 0.770636 | |||||||
| Reference | WBPaper00035539 | ||||||||
| WBPaper00065080 | |||||||||
| Method | Gene |
