WormBase Tree Display for Gene: WBGene00016894
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WBGene00016894 | SMap | S_parent | Sequence | C53B7 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Allele (22) | ||||||
RNASeq_FPKM (74) | ||||||
Ortholog (18) | ||||||
Paralog (11) | ||||||
Structured_description | Automated_description | Enriched in several structures, including MSaaaaapa; head mesodermal cell; pharyngeal cell; pharyngeal-intestinal valve; and sensory neurons based on microarray; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by eighteen chemicals including hydrogen sulfide; rotenone; and Cry5B based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | C53B7.3a | ||||
C53B7.3b | ||||||
C53B7.3c | ||||||
C53B7.3d | ||||||
Corresponding_CDS_history | C53B7.3:wp184 | |||||
Corresponding_transcript | C53B7.3a.1 | |||||
C53B7.3b.1 | ||||||
C53B7.3c.1 | ||||||
C53B7.3d.1 | ||||||
Other_sequence (14) | ||||||
Associated_feature | WBsf648266 | |||||
WBsf235876 | ||||||
WBsf235877 | ||||||
Experimental_info | RNAi_result | WBRNAi00043079 | Inferred_automatically | RNAi_primary | ||
WBRNAi00030107 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00012350 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr1026963 | |||||
Expr1147042 | ||||||
Expr2001886 | ||||||
Expr2020111 | ||||||
Drives_construct | WBCnstr00027721 | |||||
Construct_product | WBCnstr00027721 | |||||
Microarray_results (24) | ||||||
Expression_cluster (284) | ||||||
Interaction (66) | ||||||
Map_info | Positive | Positive_clone | C53B7 | Inferred_automatically | From sequence, transcript, pseudogene data | |
Interpolated_map_position | X | -2.33701 | ||||
Method | Gene |