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WormBase Tree Display for Gene: WBGene00016894

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Name Class

WBGene00016894SMapS_parentSequenceC53B7
IdentityVersion1
NameSequence_nameC53B7.3
Molecular_name (12)
Other_nameCELE_C53B7.3Accession_evidenceNDBBX284606
Public_nameC53B7.3
DB_infoDatabaseAceViewgeneXH463
WormQTLgeneWBGene00016894
WormFluxgeneWBGene00016894
NDBlocus_tagCELE_C53B7.3
PanthergeneCAEEL|WormBase=WBGene00016894|UniProtKB=H2KZE4
familyPTHR36519
NCBIgene180957
RefSeqproteinNM_001392794.1
NM_001129648.5
NM_076752.5
NM_001129647.3
TREEFAMTREEFAM_IDTF321019
TrEMBLUniProtAccH2KZE4
H2KZE2
A8WFK2
H2KZE3
UniProt_GCRPUniProtAccH2KZE4
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:58WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (22)
RNASeq_FPKM (74)
Ortholog (18)
ParalogWBGene00009481Caenorhabditis elegansFrom_analysisPanther
WBGene00013105Caenorhabditis elegansFrom_analysisPanther
WBGene00013120Caenorhabditis elegansFrom_analysisPanther
WBGene00045178Caenorhabditis elegansFrom_analysisPanther
WBGene00020224Caenorhabditis elegansFrom_analysisPanther
WBGene00045242Caenorhabditis elegansFrom_analysisPanther
WBGene00019405Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00044222Caenorhabditis elegansFrom_analysisPanther
WBGene00017361Caenorhabditis elegansFrom_analysisPanther
WBGene00194924Caenorhabditis elegansFrom_analysisPanther
WBGene00235301Caenorhabditis elegansFrom_analysisPanther
Structured_descriptionAutomated_descriptionEnriched in several structures, including MSaaaaapa; head mesodermal cell; pharyngeal cell; pharyngeal-intestinal valve; and sensory neurons based on microarray; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by eighteen chemicals including hydrogen sulfide; rotenone; and Cry5B based on microarray and RNA-seq studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC53B7.3a
C53B7.3b
C53B7.3c
C53B7.3d
Corresponding_CDS_historyC53B7.3:wp184
Corresponding_transcriptC53B7.3a.1
C53B7.3b.1
C53B7.3c.1
C53B7.3d.1
Other_sequence (14)
Associated_featureWBsf648266
WBsf235876
WBsf235877
Experimental_infoRNAi_resultWBRNAi00043079Inferred_automaticallyRNAi_primary
WBRNAi00030107Inferred_automaticallyRNAi_primary
WBRNAi00012350Inferred_automaticallyRNAi_primary
Expr_patternExpr1026963
Expr1147042
Expr2001886
Expr2020111
Drives_constructWBCnstr00027721
Construct_productWBCnstr00027721
Microarray_results (24)
Expression_cluster (284)
Interaction (66)
Map_infoPositivePositive_cloneC53B7Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionX-2.33701
MethodGene