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WormBase Tree Display for Gene: WBGene00016894

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Name Class

WBGene00016894SMapS_parentSequenceC53B7
IdentityVersion1
NameSequence_nameC53B7.3
Molecular_name (12)
Other_nameCELE_C53B7.3Accession_evidenceNDBBX284606
Public_nameC53B7.3
DB_infoDatabaseAceViewgeneXH463
WormQTLgeneWBGene00016894
WormFluxgeneWBGene00016894
NDBlocus_tagCELE_C53B7.3
PanthergeneCAEEL|WormBase=WBGene00016894|UniProtKB=H2KZE4
familyPTHR36519
NCBIgene180957
RefSeqproteinNM_001392794.1
NM_001129648.5
NM_076752.5
NM_001129647.3
TREEFAMTREEFAM_IDTF321019
TrEMBLUniProtAccH2KZE4
H2KZE2
A8WFK2
H2KZE3
UniProt_GCRPUniProtAccH2KZE4
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:58WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (22)
RNASeq_FPKM (74)
Ortholog (18)
Paralog (11)
Structured_descriptionAutomated_descriptionEnriched in several structures, including MSaaaaapa; head mesodermal cell; pharyngeal cell; pharyngeal-intestinal valve; and sensory neurons based on microarray; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by eighteen chemicals including hydrogen sulfide; rotenone; and Cry5B based on microarray and RNA-seq studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC53B7.3a
C53B7.3b
C53B7.3c
C53B7.3d
Corresponding_CDS_historyC53B7.3:wp184
Corresponding_transcriptC53B7.3a.1
C53B7.3b.1
C53B7.3c.1
C53B7.3d.1
Other_sequence (14)
Associated_featureWBsf648266
WBsf235876
WBsf235877
Experimental_infoRNAi_resultWBRNAi00043079Inferred_automaticallyRNAi_primary
WBRNAi00030107Inferred_automaticallyRNAi_primary
WBRNAi00012350Inferred_automaticallyRNAi_primary
Expr_patternExpr1026963
Expr1147042
Expr2001886
Expr2020111
Drives_constructWBCnstr00027721
Construct_productWBCnstr00027721
Microarray_results (24)
Expression_cluster (284)
InteractionWBInteraction000183054
WBInteraction000212818
WBInteraction000215604
WBInteraction000234701
WBInteraction000239725
WBInteraction000247859
WBInteraction000252819
WBInteraction000268627
WBInteraction000271343
WBInteraction000283518
WBInteraction000284281
WBInteraction000294248
WBInteraction000302352
WBInteraction000304600
WBInteraction000312296
WBInteraction000313180
WBInteraction000318499
WBInteraction000321382
WBInteraction000329430
WBInteraction000333870
WBInteraction000334742
WBInteraction000336082
WBInteraction000338208
WBInteraction000342743
WBInteraction000343912
WBInteraction000352005
WBInteraction000352491
WBInteraction000353745
WBInteraction000355103
WBInteraction000357942
WBInteraction000359442
WBInteraction000359986
WBInteraction000364505
WBInteraction000365345
WBInteraction000367239
WBInteraction000371820
WBInteraction000376528
WBInteraction000377655
WBInteraction000381902
WBInteraction000383166
WBInteraction000384921
WBInteraction000389871
WBInteraction000390397
WBInteraction000393550
WBInteraction000396537
WBInteraction000398351
WBInteraction000398948
WBInteraction000401225
WBInteraction000402319
WBInteraction000408702
WBInteraction000414278
WBInteraction000414780
WBInteraction000416054
WBInteraction000418814
WBInteraction000420578
WBInteraction000424016
WBInteraction000427471
WBInteraction000433141
WBInteraction000436542
WBInteraction000436648
WBInteraction000442726
WBInteraction000449896
WBInteraction000455687
WBInteraction000458892
WBInteraction000462516
WBInteraction000563696
Map_infoPositivePositive_cloneC53B7Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionX-2.33701
MethodGene