WormBase Tree Display for Gene: WBGene00016840

WBGene00016840 SMap: S_parent: Sequence: C50F2
  Identity: Version: 1
    Name: Sequence_name: C50F2.7
      Molecular_name: C50F2.7
        C50F2.7.1
        CE08913
      Other_name: CELE_C50F2.7 Accession_evidence: NDB BX284601
      Public_name: C50F2.7
    DB_info: Database: AceView gene 1E468
        WormQTL gene WBGene00016840
        WormFlux gene WBGene00016840
        NDB locus_tag CELE_C50F2.7
        Panther gene CAEEL|WormBase=WBGene00016840|UniProtKB=P91181
          family PTHR11337
        NCBI gene 183675
        RefSeq protein NM_058858.6
        TREEFAM TREEFAM_ID TF318870
        TrEMBL UniProtAcc P91181
        UniProt_GCRP UniProtAcc P91181
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:58 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (17)
    RNASeq_FPKM (74)
    GO_annotation: 00050209
    Ortholog (19)
    Structured_description: Automated_description: Predicted to be located in membrane. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C50F2.7
    Corresponding_transcript: C50F2.7.1
    Other_sequence: CRC01329_1
      CJC17423_1
      CR03557
    Associated_feature: WBsf649064
      WBsf219207
      WBsf219208
  Experimental_info: RNAi_result: WBRNAi00042932 Inferred_automatically: RNAi_primary
      WBRNAi00003213 Inferred_automatically: RNAi_primary
      WBRNAi00030037 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1019712
      Expr1146901
      Expr2001831
      Expr2020057
    Drives_construct: WBCnstr00027763
    Construct_product: WBCnstr00027763
    Microarray_results (19)
    Expression_cluster: WBPaper00033065:cyc-1(RNAi)_upregulated
      WBPaper00037950:BAG-neuron_blastula-embryo_expressed
      WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
      WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
      WBPaper00037950:hypodermis_L3-L4-larva_expressed
      WBPaper00040560:hpl-2_embryo_upregulated
      WBPaper00042561:smg-2(RNAi)_upregulated
      WBPaper00042561:smgl-1(RNAi)_upregulated
      WBPaper00044037:eat-2_upregulated
      WBPaper00044426:rotenone_24h_upregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00045316:prg-1_upregulated_L4
      WBPaper00045417:128Q-huntingtin_downreglated
      WBPaper00045934:wrn-1(gk99)_downregulated
      WBPaper00049954:BPS_upregulated
      WBPaper00050163:chd-3(eh4);let-418(RNAi)_upregulated_100-cell-embryo
      WBPaper00050163:let-418(RNAi)_downregulated_100-cell-embryo
      WBPaper00050234:lin-28(RNAi)_downregulated
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050726:starvation_regulated_LowSalt
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00052884:emb-4(hc60)_upregulated
      WBPaper00053094:adr-2(ok735)_neuron_upregulated
      WBPaper00053184:sma-2(rax5)_upregulated
      WBPaper00053184:sma-4(rax3)_upregulated
      WBPaper00053664:ins-11(tm1053)_downregulated
      WBPaper00053810:clk-1(qm30)_upregulated
      WBPaper00053810:nuo-6(qm200)_upregulated
      WBPaper00055354:Psora-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Metformin_downregulated
      WBPaper00055626:pry-1(mu38)_downregulated
      WBPaper00055648:nerve-ring_expressed
      WBPaper00055941:nuo-6(qm200);atfs-1(gk3094)_upregulated
      WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
      WBPaper00057265:metaformin_downregulated_OP50-MR
      WBPaper00058598:mex-1(or286)_upregulated
      WBPaper00058598:mex-3(eu149)_upregulated
      WBPaper00058598:spn-4(tm291)_upregulated
      WBPaper00058711:wdr-5(ok1417)_upregulated
      WBPaper00058948:npr-8(ok1439)_downregulated_OP50
      WBPaper00058948:PA14_downregulated
      WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
      WBPaper00059421:daf-1(m40);daf-3(mgDf90)_downregulated
      WBPaper00059421:daf-3(mgDf90)_downregulated
      WBPaper00059987:Wounding_upregulated
      WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
      WBPaper00060445:nfki-1(cer1)_downregulated_L4
      WBPaper00061203:let-418(n3536)_upregulated
      WBPaper00061274:hypergravity_15xg_downregulated
      WBPaper00061340:g1A
      WBPaper00061340:g1A_g1P
      WBPaper00061340:g1P
      WBPaper00061340:GLR
      WBPaper00061340:hmc_and_homolog
      WBPaper00061341:28C_24h_upregulated
      WBPaper00061341:28C_48h_upregulated
      WBPaper00061527:flp-5-F17C11.2
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062193:skn-1(RNAi)_upregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00064088:Day-1-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
      WBPaper00064088:Day-1-adult_vs_L4_upregulated_glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
      WBPaper00064156:lbp-3(overexpress)_upregulated
      WBPaper00064156:lipl-4(overexpress)_upregulated
      WBPaper00065096:npr-8(ok1439)_downregulated_Day10_20C
      WBPaper00065841:41_0
      WBPaper00065841:41_1
      WBPaper00065841:41_2
      WBPaper00065841:74_0
      WBPaper00065841:78_0
      WBPaper00065841:89_0
      WBPaper00065993:glp-1(e2141)_upregulated
      WBPaper00066146:germline-inx-14(RNAi)_upregulated_PA14
      cgc4386_cluster_5_4
      cgc4489_group_17
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00030985:Erwinia_carotovora_upregulated
      WBPaper00031003:0hr_muscle_depleted
      WBPaper00031003:24hr_muscle_depleted
      WBPaper00031003:total_muscle_depleted
      WBPaper00031532:Larva_Pan_Neuronal_Depleted
      WBPaper00036286:Pattern_D
      WBPaper00037695:WC_5-day
      WBPaper00038172:crh-1null_up_regulated
      WBPaper00038172:tax-6null_up_regulated
      WBPaper00040603:tdp-1(lf)_down_vs_N2_FC_1.2
      WBPaper00040858:eQTL_regulated_old
      WBPaper00040876:mir-35_downregulated
      WBPaper00041002:HF_11d_0.2mM_Up
      WBPaper00041939:control_vs_EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
      WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00042274:tbx-2(bx59)_upregulated
      WBPaper00045263:nuo-6(qm200)_upregulated
      WBPaper00047070:N2_starvation_upregulated
      WBPaper00047070:N2_UV_upregulated
      WBPaper00047070:xpa-1_UV_upregulated
      WBPaper00053236:Starvation_regulated_GR1307
      WBPaper00057098:SiO2-nanoparticles_upregulated
      [cgc5767]:expression_class_E
      [cgc5767]:expression_class_E_pi(53_min)
      [cgc5767]:expression_class_SE
      [cgc5767]:expression_class_SE_pi(53_min)
    Interaction: WBInteraction000241119
      WBInteraction000277863
      WBInteraction000332368
      WBInteraction000462290
  Map_info: Positive: Positive_clone: C50F2 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: I -1.92919
  Method: Gene