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WormBase Tree Display for Gene: WBGene00016839

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Name Class

WBGene00016839SMapS_parentSequenceC50F2
IdentityVersion1
NameSequence_nameC50F2.5
Molecular_nameC50F2.5
C50F2.5.1
CE08911
Other_nameCELE_C50F2.5Accession_evidenceNDBBX284601
Public_nameC50F2.5
DB_infoDatabaseAceViewgene1E464
WormFluxgeneWBGene00016839
NDBlocus_tagCELE_C50F2.5
PanthergeneCAEEL|WormBase=WBGene00016839|UniProtKB=P91179
familyPTHR46163
NCBIgene171973
RefSeqproteinNM_058855.5
TREEFAMTREEFAM_IDTF318637
TrEMBLUniProtAccP91179
UniProt_GCRPUniProtAccP91179
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:58WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (19)
RNASeq_FPKM (74)
GO_annotation00122368
00122369
Contained_in_operonCEOP1132
Ortholog (45)
Paralog (64)
Structured_descriptionAutomated_descriptionPredicted to enable protein tyrosine phosphatase activity. Human ortholog(s) of this gene implicated in gastric adenocarcinoma. Is an ortholog of human PTPRG (protein tyrosine phosphatase receptor type G) and PTPRZ1 (protein tyrosine phosphatase receptor type Z1).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:3717Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:9685)
Molecular_infoCorresponding_CDSC50F2.5
Corresponding_transcriptC50F2.5.1
Other_sequenceCBC14167_1
Associated_featureWBsf983266
WBsf1009574
WBsf219203
Experimental_infoRNAi_resultWBRNAi00042930Inferred_automaticallyRNAi_primary
WBRNAi00003211Inferred_automaticallyRNAi_primary
WBRNAi00042384Inferred_automaticallyRNAi_primary
WBRNAi00003143Inferred_automaticallyRNAi_primary
WBRNAi00030035Inferred_automaticallyRNAi_primary
Expr_patternExpr1146899
Expr2001830
Expr2020056
Drives_constructWBCnstr00027764
Construct_productWBCnstr00027764
Microarray_results (20)
Expression_cluster (164)
Interaction (136)
Map_infoPositivePositive_cloneC50F2Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionI-1.93246
MethodGene