WormBase Tree Display for Gene: WBGene00016831
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| WBGene00016831 | SMap | S_parent | Sequence | C50E10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | sre-56 | Person_evidence | WBPerson522 | |||||
| Sequence_name | C50E10.8 | ||||||||
| Molecular_name | C50E10.8 | ||||||||
| C50E10.8.1 | |||||||||
| CE19762 | |||||||||
| Other_name | CELE_C50E10.8 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | sre-56 | ||||||||
| DB_info | Database | AceView | gene | 2M615 | |||||
| WormQTL | gene | WBGene00016831 | |||||||
| WormFlux | gene | WBGene00016831 | |||||||
| NDB | locus_tag | CELE_C50E10.8 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016831|UniProtKB=A3QMA6 | |||||||
| family | PTHR47757 | ||||||||
| NCBI | gene | 183669 | |||||||
| RefSeq | protein | NM_064216.2 | |||||||
| TREEFAM | TREEFAM_ID | TF316213 | |||||||
| TrEMBL | UniProtAcc | A3QMA6 | |||||||
| UniProt_GCRP | UniProtAcc | A3QMA6 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 18 Jan 2005 14:50:06 | WBPerson2970 | Name_change | CGC_name | sre-56 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | sre | ||||||||
| Allele (99) | |||||||||
| Strain | WBStrain00002030 | ||||||||
| WBStrain00002538 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00004345 | ||||||||
| 00004346 | |||||||||
| 00122358 | |||||||||
| 00122359 | |||||||||
| Ortholog (16) | |||||||||
| Paralog (45) | |||||||||
| Structured_description | Automated_description | Predicted to be involved in sensory perception of chemical stimulus. Predicted to be located in membrane. Expressed in head. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C50E10.8 | |||||||
| Corresponding_transcript | C50E10.8.1 | ||||||||
| Other_sequence | OF01496 | ||||||||
| Associated_feature | WBsf990050 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00012219 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00030028 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00042906 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1323 | ||||||||
| Expr5555 | |||||||||
| Expr1011145 | |||||||||
| Expr1146877 | |||||||||
| Expr2016308 | |||||||||
| Drives_construct | WBCnstr00002814 | ||||||||
| WBCnstr00004431 | |||||||||
| WBCnstr00027770 | |||||||||
| Construct_product | WBCnstr00027770 | ||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (19) | |||||||||
| Interaction (62) | |||||||||
| Map_info | Map | II | Position | 7.9887 | Error | 0.020084 | |||
| Positive | Positive_clone | C50E10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
