WormBase Tree Display for Gene: WBGene00016791
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| WBGene00016791 | SMap | S_parent | Sequence | C49H3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C49H3.4 | |||||||
| Molecular_name | C49H3.4 | ||||||||
| C49H3.4.1 | |||||||||
| CE34766 | |||||||||
| Other_name | CELE_C49H3.4 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | C49H3.4 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (16) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00092928 | ||||||||
| 00092929 | |||||||||
| 00092930 | |||||||||
| 00122332 | |||||||||
| Contained_in_operon | CEOP4264 | ||||||||
| Ortholog (21) | |||||||||
| Structured_description | Automated_description | Predicted to enable U7 snRNA binding activity. Predicted to be involved in mRNA 3'-end processing by stem-loop binding activity and cleavage. Predicted to be part of U7 snRNP. Human ortholog(s) of this gene implicated in Aicardi-Goutieres syndrome. Is an ortholog of human LSM11 (LSM11, U7 small nuclear RNA associated). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0050629 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:30860) | ||||
| Molecular_info | Corresponding_CDS | C49H3.4 | |||||||
| Corresponding_CDS_history | C49H3.4:wp96 | ||||||||
| C49H3.4:wp105 | |||||||||
| Corresponding_transcript | C49H3.4.1 | ||||||||
| Associated_feature | WBsf997078 | ||||||||
| WBsf228596 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00085109 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00062170 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00117312 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00117301 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00029999 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00012166 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00042837 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00117291 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1016155 | ||||||||
| Expr1037206 | |||||||||
| Expr1146816 | |||||||||
| Expr2001792 | |||||||||
| Expr2020019 | |||||||||
| Drives_construct | WBCnstr00027801 | ||||||||
| Construct_product | WBCnstr00027801 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (76) | |||||||||
| Interaction | WBInteraction000031749 | ||||||||
| WBInteraction000308406 | |||||||||
| WBInteraction000354584 | |||||||||
| WBInteraction000458551 | |||||||||
| WBInteraction000517152 | |||||||||
| WBInteraction000517153 | |||||||||
| WBInteraction000517154 | |||||||||
| WBInteraction000539423 | |||||||||
| Map_info | Positive | Positive_clone | C49H3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 3.49668 | |||||||
| Method | Gene |
