WormBase Tree Display for Gene: WBGene00016781
expand all nodes | collapse all nodes | view schema
| WBGene00016781 | SMap | S_parent | Sequence | C49G7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | phat-7 | Person_evidence | WBPerson625 | |||||
| Sequence_name | C49G7.3 | ||||||||
| Molecular_name | C49G7.3 | ||||||||
| C49G7.3.1 | |||||||||
| CE08861 | |||||||||
| Other_name | CELE_C49G7.3 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | phat-7 | ||||||||
| DB_info | Database | AceView | gene | 5E525 | |||||
| WormQTL | gene | WBGene00016781 | |||||||
| WormFlux | gene | WBGene00016781 | |||||||
| NDB | locus_tag | CELE_C49G7.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016781|UniProtKB=O16226 | |||||||
| family | PTHR21724 | ||||||||
| NCBI | gene | 178810 | |||||||
| RefSeq | protein | NM_071729.7 | |||||||
| TREEFAM | TREEFAM_ID | TF317956 | |||||||
| TrEMBL | UniProtAcc | O16226 | |||||||
| UniProt_GCRP | UniProtAcc | O16226 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 10 Sep 2020 13:33:49 | WBPerson1983 | Name_change | CGC_name | phat-7 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | phat | ||||||||
| Allele (30) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (27) | |||||||||
| Paralog (63) | |||||||||
| Structured_description | Automated_description | Enriched in g1P; germ line; intestine; and mechanosensory neurons based on proteomic; tiling array; microarray; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by seventeen chemicals including Ethanol; rotenone; and D-glucose based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: ShK domain-like and ShKT domain. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C49G7.3 | |||||||
| Corresponding_transcript | C49G7.3.1 | ||||||||
| Other_sequence | CR03476 | ||||||||
| CRC01770_1 | |||||||||
| CR08290 | |||||||||
| CBC05945_1 | |||||||||
| Associated_feature | WBsf231631 | ||||||||
| WBsf231632 | |||||||||
| WBsf231633 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00042822 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00029989 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1011258 | ||||||||
| Expr1146803 | |||||||||
| Expr2001786 | |||||||||
| Drives_construct | WBCnstr00027807 | ||||||||
| Construct_product | WBCnstr00027807 | ||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (219) | |||||||||
| Interaction | WBInteraction000143336 | ||||||||
| WBInteraction000189579 | |||||||||
| WBInteraction000190911 | |||||||||
| WBInteraction000193892 | |||||||||
| WBInteraction000197117 | |||||||||
| WBInteraction000199085 | |||||||||
| WBInteraction000202863 | |||||||||
| WBInteraction000209068 | |||||||||
| WBInteraction000221949 | |||||||||
| WBInteraction000223593 | |||||||||
| WBInteraction000236944 | |||||||||
| WBInteraction000237563 | |||||||||
| WBInteraction000240344 | |||||||||
| WBInteraction000249275 | |||||||||
| WBInteraction000251273 | |||||||||
| WBInteraction000259970 | |||||||||
| WBInteraction000263758 | |||||||||
| WBInteraction000273710 | |||||||||
| WBInteraction000296336 | |||||||||
| WBInteraction000306382 | |||||||||
| WBInteraction000306439 | |||||||||
| WBInteraction000312885 | |||||||||
| WBInteraction000322245 | |||||||||
| WBInteraction000345594 | |||||||||
| WBInteraction000347828 | |||||||||
| WBInteraction000359709 | |||||||||
| WBInteraction000365495 | |||||||||
| WBInteraction000378720 | |||||||||
| WBInteraction000378758 | |||||||||
| WBInteraction000382724 | |||||||||
| WBInteraction000391254 | |||||||||
| WBInteraction000395404 | |||||||||
| WBInteraction000413908 | |||||||||
| WBInteraction000416607 | |||||||||
| WBInteraction000432888 | |||||||||
| WBInteraction000438510 | |||||||||
| WBInteraction000442825 | |||||||||
| WBInteraction000452153 | |||||||||
| WBInteraction000452469 | |||||||||
| WBInteraction000457339 | |||||||||
| WBInteraction000566417 | |||||||||
| WBInteraction000566696 | |||||||||
| Map_info | Positive | Positive_clone | C49G7 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | -6.85079 | |||||||
| Reference | WBPaper00041771 | ||||||||
| WBPaper00058224 | |||||||||
| Method | Gene |
