WormBase Tree Display for Gene: WBGene00016759
expand all nodes | collapse all nodes | view schema
| WBGene00016759 | SMap | S_parent | Sequence | C49A9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C49A9.5 | |||||||
| Molecular_name | C49A9.5 | ||||||||
| C49A9.5.1 | |||||||||
| CE16935 | |||||||||
| C49A9.5.2 | |||||||||
| Other_name | CELE_C49A9.5 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | C49A9.5 | ||||||||
| DB_info | Database | AceView | gene | 4G979 | |||||
| WormQTL | gene | WBGene00016759 | |||||||
| WormFlux | gene | WBGene00016759 | |||||||
| NDB | locus_tag | CELE_C49A9.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016759|UniProtKB=O44151 | |||||||
| family | PTHR21516 | ||||||||
| NCBI | gene | 177382 | |||||||
| RefSeq | protein | NM_001383100.2 | |||||||
| TREEFAM | TREEFAM_ID | TF318575 | |||||||
| TrEMBL | UniProtAcc | O44151 | |||||||
| UniProt_GCRP | UniProtAcc | O44151 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (43) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (15) | |||||||||
| Paralog (30) | |||||||||
| Structured_description | Automated_description | Enriched in FLP; head mesodermal cell; intestine; and rectal gland cell based on tiling array; microarray; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; skn-1; and hsf-1 based on microarray and RNA-seq studies. Is affected by sixteen chemicals including D-glucopyranose; bisphenol S; and stavudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Protein of unknown function (DUF272) and Protein of unknown function DUF272. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C49A9.5 | |||||||
| Corresponding_transcript | C49A9.5.1 | ||||||||
| C49A9.5.2 | |||||||||
| Associated_feature | WBsf646006 | ||||||||
| WBsf646007 | |||||||||
| WBsf228376 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00042767 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00012112 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00029959 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1011104 | ||||||||
| Expr1037198 | |||||||||
| Expr1146753 | |||||||||
| Expr2001758 | |||||||||
| Expr2019986 | |||||||||
| Drives_construct | WBCnstr00027825 | ||||||||
| Construct_product | WBCnstr00027825 | ||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (133) | |||||||||
| Interaction | WBInteraction000390571 | ||||||||
| WBInteraction000424829 | |||||||||
| WBInteraction000448054 | |||||||||
| Map_info | Positive | Positive_clone | C49A9 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 3.10394 | |||||||
| Method | Gene |
