WormBase Tree Display for Gene: WBGene00016743
expand all nodes | collapse all nodes | view schema
| WBGene00016743 | SMap | S_parent | Sequence | C48B6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | srb-15 | Person_evidence | WBPerson522 | |||||
| WBPerson3024 | |||||||||
| Sequence_name | C48B6.5 | ||||||||
| Molecular_name | C48B6.5 | ||||||||
| C48B6.5.1 | |||||||||
| CE38163 | |||||||||
| Other_name | CELE_C48B6.5 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | srb-15 | ||||||||
| DB_info | Database | AceView | gene | 1H470 | |||||
| WormQTL | gene | WBGene00016743 | |||||||
| WormFlux | gene | WBGene00016743 | |||||||
| NDB | locus_tag | CELE_C48B6.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016743|UniProtKB=O01509 | |||||||
| family | PTHR31216 | ||||||||
| NCBI | gene | 183571 | |||||||
| RefSeq | protein | NM_059568.3 | |||||||
| SwissProt | UniProtAcc | O01509 | |||||||
| TREEFAM | TREEFAM_ID | TF315769 | |||||||
| UniProt_GCRP | UniProtAcc | O01509 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 18 Jan 2005 10:41:52 | WBPerson2970 | Name_change | CGC_name | srb-15 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | srb | ||||||||
| Allele (30) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00024854 | ||||||||
| 00024855 | |||||||||
| 00122285 | |||||||||
| 00122286 | |||||||||
| 00122287 | |||||||||
| Ortholog (24) | |||||||||
| Paralog (42) | |||||||||
| Structured_description | Automated_description | Predicted to enable transmembrane signaling receptor activity. Predicted to be involved in sensory perception of chemical stimulus. Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C48B6.5 | |||||||
| Corresponding_CDS_history | C48B6.5:wp140 | ||||||||
| Corresponding_transcript | C48B6.5.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00042724 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1024062 | ||||||||
| Expr1146715 | |||||||||
| Expr2016178 | |||||||||
| Expr2034408 | |||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (45) | |||||||||
| Interaction | WBInteraction000213949 | ||||||||
| WBInteraction000275625 | |||||||||
| WBInteraction000286533 | |||||||||
| WBInteraction000308276 | |||||||||
| WBInteraction000377361 | |||||||||
| WBInteraction000390109 | |||||||||
| WBInteraction000394617 | |||||||||
| WBInteraction000415382 | |||||||||
| WBInteraction000428200 | |||||||||
| WBInteraction000447659 | |||||||||
| Map_info | Map | I | Position | 1.46475 | Error | 0.007279 | |||
| Positive | Positive_clone | C48B6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
