WormBase Tree Display for Gene: WBGene00016741
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| WBGene00016741 | SMap | S_parent | Sequence | C48B6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | haps-1 | Paper_evidence | WBPaper00064919 | |||||
| Person_evidence | WBPerson35162 | ||||||||
| WBPerson60422 | |||||||||
| WBPerson60423 | |||||||||
| Sequence_name | C48B6.3 | ||||||||
| Molecular_name | C48B6.3 | ||||||||
| C48B6.3.1 | |||||||||
| CE08805 | |||||||||
| Other_name | CELE_C48B6.3 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | haps-1 | ||||||||
| DB_info | Database | AceView | gene | 1H491 | |||||
| WormQTL | gene | WBGene00016741 | |||||||
| WormFlux | gene | WBGene00016741 | |||||||
| NDB | locus_tag | CELE_C48B6.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016741|UniProtKB=O01512 | |||||||
| family | PTHR31624 | ||||||||
| NCBI | gene | 172419 | |||||||
| RefSeq | protein | NM_059570.7 | |||||||
| TREEFAM | TREEFAM_ID | TF323292 | |||||||
| TrEMBL | UniProtAcc | O01512 | |||||||
| UniProt_GCRP | UniProtAcc | O01512 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 12 Jan 2023 20:48:33 | WBPerson51134 | Name_change | CGC_name | haps-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | haps | ||||||||
| Allele (21) | |||||||||
| Possibly_affected_by | WBVar02158573 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00024879 | ||||||||
| 00024880 | |||||||||
| Contained_in_operon | CEOP1356 | ||||||||
| Ortholog (32) | |||||||||
| Structured_description | Automated_description | Predicted to be located in nucleus. Expressed in germ line. Is an ortholog of human HAPSTR1 (HUWE1 associated protein modifying stress responses). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C48B6.3 | |||||||
| Corresponding_transcript | C48B6.3.1 | ||||||||
| Other_sequence | CBC01436_1 | ||||||||
| CRC03085_1 | |||||||||
| CR01567 | |||||||||
| CJC10810_1 | |||||||||
| Associated_feature | WBsf643415 | ||||||||
| WBsf984029 | |||||||||
| WBsf217920 | |||||||||
| WBsf217921 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00042722 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00008185 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00029938 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00094993 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00003187 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr4087 | ||||||||
| Expr1010999 | |||||||||
| Expr1037189 | |||||||||
| Expr1146713 | |||||||||
| Expr2001740 | |||||||||
| Expr2019968 | |||||||||
| Microarray_results (26) | |||||||||
| Expression_cluster (124) | |||||||||
| Interaction (21) | |||||||||
| Map_info | Map | I | Position | 1.50095 | |||||
| Positive | Positive_clone | C48B6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00064898 | ||||||||
| WBPaper00064919 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
