WormBase Tree Display for Gene: WBGene00016737
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| WBGene00016737 | SMap | S_parent | Sequence | C47C12 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | ||||||||
| Name | CGC_name | miro-2 | Person_evidence | WBPerson1105 | ||||||
| Sequence_name | C47C12.4 | |||||||||
| Molecular_name | C47C12.4 | |||||||||
| Other_name | CELE_C47C12.4 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | miro-2 | |||||||||
| DB_info | Database | AceView | gene | XI366 | ||||||
| WormQTL | gene | WBGene00016737 | ||||||||
| WormFlux | gene | WBGene00016737 | ||||||||
| NDB | locus_tag | CELE_C47C12.4 | ||||||||
| NCBI | gene | 183540 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | |||
| 2 | 10 Jan 2012 11:18:39 | WBPerson2970 | Name_change | CGC_name | miro-2 | |||||
| 3 | 18 Feb 2016 15:25:13 | WBPerson1983 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Gene_class | miro | |||||||||
| Allele (31) | ||||||||||
| Strain | WBStrain00047241 | |||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog | WBGene00143195 | Caenorhabditis brenneri | From_analysis | TreeFam | ||||||
| WBGene00122287 | Caenorhabditis japonica | From_analysis | TreeFam | |||||||
| WBGene00062803 | Caenorhabditis remanei | From_analysis | TreeFam | |||||||
| Structured_description | Automated_description | Is affected by several genes including daf-16; sir-2.1; and pgl-1 based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | C47C12.4:wp252 | ||||||||
| Corresponding_pseudogene | C47C12.4 | |||||||||
| Other_sequence | JO468328.1 | |||||||||
| Dviv_isotig13273 | ||||||||||
| Dviv_isotig21834 | ||||||||||
| BXC03274_1 | ||||||||||
| Associated_feature | WBsf1005943 | |||||||||
| WBsf1005944 | ||||||||||
| WBsf1005945 | ||||||||||
| WBsf1005946 | ||||||||||
| WBsf1023302 | ||||||||||
| WBsf1023303 | ||||||||||
| WBsf1023304 | ||||||||||
| WBsf1023305 | ||||||||||
| Experimental_info | Expr_pattern | Expr1019221 | ||||||||
| Expr1146647 | ||||||||||
| Microarray_results | SMD_C47C12.4 | |||||||||
| SMD_C47C12.4:2 | ||||||||||
| 190927_at | ||||||||||
| A_12_P116912 | ||||||||||
| Aff_C47C12.4 | ||||||||||
| Expression_cluster (41) | ||||||||||
| Interaction (19) | ||||||||||
| Map_info | Map | X | Position | -1.29801 | ||||||
| Positive | Positive_clone | C47C12 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
| Pseudo_map_position | ||||||||||
| Reference | WBPaper00038491 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
