WormBase Tree Display for Gene: WBGene00016677
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WBGene00016677 | SMap | S_parent | Sequence | C45G9 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | C45G9.6 | |||||||
Molecular_name | C45G9.6a | ||||||||
C45G9.6a.1 | |||||||||
CE54095 | |||||||||
C45G9.6b | |||||||||
CE30634 | |||||||||
C45G9.6b.1 | |||||||||
Other_name | CELE_C45G9.6 | Accession_evidence | NDB | BX284603 | |||||
Public_name | C45G9.6 | ||||||||
DB_info | Database | AceView | gene | 3G129 | |||||
WormQTL | gene | WBGene00016677 | |||||||
WormFlux | gene | WBGene00016677 | |||||||
NDB | locus_tag | CELE_C45G9.6 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00016677|UniProtKB=Q09279 | |||||||
family | PTHR33459 | ||||||||
NCBI | gene | 175684 | |||||||
RefSeq | protein | NM_001379695.2 | |||||||
NM_171111.8 | |||||||||
SwissProt | UniProtAcc | Q09279 | |||||||
UniProt_GCRP | UniProtAcc | Q09279 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (42) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (24) | |||||||||
Structured_description | Automated_description | Enriched in several structures, including ABplppppaa; ABprppppaa; ALN; rectal epithelial cell; and rectum based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by ten chemicals including hydrogen sulfide; mianserin; and Zidovudine based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed (2) | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C45G9.6a | |||||||
C45G9.6b | |||||||||
Corresponding_CDS_history | C45G9.6a:wp275 | ||||||||
Corresponding_transcript | C45G9.6a.1 | ||||||||
C45G9.6b.1 | |||||||||
Other_sequence | CSC00582_1 | ||||||||
FD514618.1 | |||||||||
Associated_feature | WBsf645141 | ||||||||
WBsf658881 | |||||||||
WBsf658882 | |||||||||
WBsf992275 | |||||||||
WBsf992276 | |||||||||
WBsf224850 | |||||||||
Experimental_info | RNAi_result | WBRNAi00000803 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00042555 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00005540 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1024406 | ||||||||
Expr1037167 | |||||||||
Expr1146538 | |||||||||
Expr2001664 | |||||||||
Expr2019891 | |||||||||
Drives_construct | WBCnstr00027896 | ||||||||
Construct_product | WBCnstr00027896 | ||||||||
Microarray_results | SMD_C45G9.6 | ||||||||
174481_at | |||||||||
187424_s_at | |||||||||
A_12_P104643 | |||||||||
A_12_P117179 | |||||||||
Aff_C45G9.6 | |||||||||
GPL13394_WBGene00016677 | |||||||||
GPL13914_C45G9.6 | |||||||||
GPL14144_C45G9.6a_1102-1161_0.927_10_B | |||||||||
GPL14144_C45G9.6a_1209-1268_0.913_13_C | |||||||||
GPL14144_C45G9.6a_1462-1521_0.961_1_A | |||||||||
GPL19516_CGZ0009036 | |||||||||
GPL19516_CGZ0009037 | |||||||||
GPL21109_C45G9.6a | |||||||||
GPL21109_C45G9.6b | |||||||||
GPL8304_CE_WBGene00016677_A | |||||||||
GPL8304_CE_WBGene00016677_B | |||||||||
GPL8673_C45G9_6aP00965 | |||||||||
GPL8673_C45G9_6aP01262 | |||||||||
GPL8673_C45G9_6aP01538 | |||||||||
GPL8673_C45G9_6bP00017 | |||||||||
GPL8673_C45G9_6bP00337 | |||||||||
GPL8673_C45G9_6bP00388 | |||||||||
GPL9450_C45G9.6a | |||||||||
GPL9450_C45G9.6b | |||||||||
cea2.d.17001 | |||||||||
cea2.p.59625 | |||||||||
Expression_cluster (160) | |||||||||
Interaction | WBInteraction000032461 | ||||||||
WBInteraction000208610 | |||||||||
WBInteraction000221009 | |||||||||
WBInteraction000267702 | |||||||||
Map_info | Positive | Positive_clone | C45G9 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | III | -2.2086 | |||||||
Method | Gene |