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WormBase Tree Display for Gene: WBGene00016677

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Name Class

WBGene00016677SMapS_parentSequenceC45G9
IdentityVersion1
NameSequence_nameC45G9.6
Molecular_nameC45G9.6a
C45G9.6a.1
CE54095
C45G9.6b
CE30634
C45G9.6b.1
Other_nameCELE_C45G9.6Accession_evidenceNDBBX284603
Public_nameC45G9.6
DB_infoDatabaseAceViewgene3G129
WormQTLgeneWBGene00016677
WormFluxgeneWBGene00016677
NDBlocus_tagCELE_C45G9.6
PanthergeneCAEEL|WormBase=WBGene00016677|UniProtKB=Q09279
familyPTHR33459
NCBIgene175684
RefSeqproteinNM_001379695.2
NM_171111.8
SwissProtUniProtAccQ09279
UniProt_GCRPUniProtAccQ09279
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:57WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (42)
RNASeq_FPKM (74)
Ortholog (24)
Structured_descriptionAutomated_descriptionEnriched in several structures, including ABplppppaa; ABprppppaa; ALN; rectal epithelial cell; and rectum based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by ten chemicals including hydrogen sulfide; mianserin; and Zidovudine based on microarray and RNA-seq studies.Paper_evidenceWBPaper00065943
Curator_confirmed (2)
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC45G9.6a
C45G9.6b
Corresponding_CDS_historyC45G9.6a:wp275
Corresponding_transcriptC45G9.6a.1
C45G9.6b.1
Other_sequenceCSC00582_1
FD514618.1
Associated_featureWBsf645141
WBsf658881
WBsf658882
WBsf992275
WBsf992276
WBsf224850
Experimental_infoRNAi_resultWBRNAi00000803Inferred_automaticallyRNAi_primary
WBRNAi00042555Inferred_automaticallyRNAi_primary
WBRNAi00005540Inferred_automaticallyRNAi_primary
Expr_patternExpr1024406
Expr1037167
Expr1146538
Expr2001664
Expr2019891
Drives_constructWBCnstr00027896
Construct_productWBCnstr00027896
Microarray_resultsSMD_C45G9.6
174481_at
187424_s_at
A_12_P104643
A_12_P117179
Aff_C45G9.6
GPL13394_WBGene00016677
GPL13914_C45G9.6
GPL14144_C45G9.6a_1102-1161_0.927_10_B
GPL14144_C45G9.6a_1209-1268_0.913_13_C
GPL14144_C45G9.6a_1462-1521_0.961_1_A
GPL19516_CGZ0009036
GPL19516_CGZ0009037
GPL21109_C45G9.6a
GPL21109_C45G9.6b
GPL8304_CE_WBGene00016677_A
GPL8304_CE_WBGene00016677_B
GPL8673_C45G9_6aP00965
GPL8673_C45G9_6aP01262
GPL8673_C45G9_6aP01538
GPL8673_C45G9_6bP00017
GPL8673_C45G9_6bP00337
GPL8673_C45G9_6bP00388
GPL9450_C45G9.6a
GPL9450_C45G9.6b
cea2.d.17001
cea2.p.59625
Expression_cluster (160)
InteractionWBInteraction000032461
WBInteraction000208610
WBInteraction000221009
WBInteraction000267702
Map_infoPositivePositive_cloneC45G9Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIII-2.2086
MethodGene