WormBase Tree Display for Gene: WBGene00016667
expand all nodes | collapse all nodes | view schema
| WBGene00016667 | SMap | S_parent | Sequence | C45E5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | cpg-18 | Paper_evidence | WBPaper00053350 | |||||
| Sequence_name | C45E5.4 | ||||||||
| Molecular_name | C45E5.4 | ||||||||
| C45E5.4.1 | |||||||||
| CE08732 | |||||||||
| Other_name | CELE_C45E5.4 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | cpg-18 | ||||||||
| DB_info | Database | AceView | gene | 4G501 | |||||
| WormQTL | gene | WBGene00016667 | |||||||
| WormFlux | gene | WBGene00016667 | |||||||
| NDB | locus_tag | CELE_C45E5.4 | |||||||
| NCBI | gene | 183472 | |||||||
| RefSeq | protein | NM_068453.7 | |||||||
| TREEFAM | TREEFAM_ID | TF318323 | |||||||
| TrEMBL | UniProtAcc | Q18642 | |||||||
| UniProt_GCRP | UniProtAcc | Q18642 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 09 Jun 2020 16:54:31 | WBPerson1983 | Name_change | CGC_name | cpg-18 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cpg | ||||||||
| Allele | WBVar01499365 | ||||||||
| WBVar01923417 | |||||||||
| WBVar01923418 | |||||||||
| WBVar01786372 | |||||||||
| WBVar01786373 | |||||||||
| WBVar00189117 | |||||||||
| WBVar00189118 | |||||||||
| WBVar00189119 | |||||||||
| WBVar01499395 | |||||||||
| WBVar00189120 | |||||||||
| WBVar01499396 | |||||||||
| WBVar00189121 | |||||||||
| WBVar00912068 | |||||||||
| WBVar00912069 | |||||||||
| WBVar00912070 | |||||||||
| WBVar00912071 | |||||||||
| WBVar00912072 | |||||||||
| WBVar00912073 | |||||||||
| WBVar00912074 | |||||||||
| WBVar00912075 | |||||||||
| WBVar00912076 | |||||||||
| WBVar00912077 | |||||||||
| WBVar01499242 | |||||||||
| WBVar00912078 | |||||||||
| WBVar01499633 | |||||||||
| WBVar00572544 | |||||||||
| WBVar02124413 | |||||||||
| WBVar00425709 | |||||||||
| WBVar01500245 | |||||||||
| WBVar00425710 | |||||||||
| WBVar00425711 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (20) | |||||||||
| Structured_description | Automated_description | Enriched in ABalpppppp; ABpraaappp; OLL; PVD; and pharynx based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; rrf-3; and eat-2 based on microarray; tiling array; and RNA-seq studies. Is affected by eighteen chemicals including Heme; Mercuric Chloride; and rotenone based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C45E5.4 | |||||||
| Corresponding_transcript | C45E5.4.1 | ||||||||
| Other_sequence | CSC00054_1 | ||||||||
| FD517304.1 | |||||||||
| Associated_feature | WBsf996584 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00029832 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00011980 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00042530 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1024756 | ||||||||
| Expr1146517 | |||||||||
| Expr2001653 | |||||||||
| Expr2019879 | |||||||||
| Drives_construct | WBCnstr00027904 | ||||||||
| Construct_product | WBCnstr00027904 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (167) | |||||||||
| Interaction | WBInteraction000392100 | ||||||||
| WBInteraction000421609 | |||||||||
| WBInteraction000440451 | |||||||||
| Map_info | Positive | Positive_clone | C45E5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 2.25428 | |||||||
| Method | Gene |
