WormBase Tree Display for Gene: WBGene00016650
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| WBGene00016650 | SMap | S_parent | Sequence | C44E4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 4 | |||||||
| Name | CGC_name | ubr-4 | Person_evidence | WBPerson105 | |||||
| WBPerson15935 | |||||||||
| Sequence_name | C44E4.1 | ||||||||
| Molecular_name | C44E4.1a | ||||||||
| C44E4.1a.1 | |||||||||
| CE47798 | |||||||||
| C44E4.1d | |||||||||
| CE51234 | |||||||||
| C44E4.1c | |||||||||
| C44E4.1d.1 | |||||||||
| Other_name | CELE_C44E4.1 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | ubr-4 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 23 Jul 2012 16:19:42 | WBPerson1849 | Event | Acquires_merge | WBGene00016651 | ||||
| 3 | 23 Jul 2012 16:19:42 | WBPerson1849 | Event | Acquires_merge | WBGene00016656 | ||||
| 4 | 04 Sep 2015 11:19:37 | WBPerson2970 | Name_change | CGC_name | ubr-4 | ||||
| Acquires_merge | WBGene00016651 | ||||||||
| WBGene00016656 | |||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ubr | ||||||||
| Allele (239) | |||||||||
| Strain | WBStrain00001497 | ||||||||
| WBStrain00002484 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00001813 | ||||||||
| 00122217 | |||||||||
| 00122218 | |||||||||
| Ortholog (50) | |||||||||
| Paralog | WBGene00009460 | ||||||||
| Structured_description | Automated_description | Predicted to enable zinc ion binding activity. Predicted to be involved in DNA replication. Is an ortholog of human UBR4 (ubiquitin protein ligase E3 component n-recognin 4). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C44E4.1a | |||||||
| C44E4.1d | |||||||||
| Corresponding_CDS_history | C44E4.1a:wp233 | ||||||||
| C44E4.1b:wp277 | |||||||||
| C44E4.1c:wp250 | |||||||||
| Corresponding_transcript | C44E4.1c | ||||||||
| C44E4.1a.1 | |||||||||
| C44E4.1d.1 | |||||||||
| Other_sequence (31) | |||||||||
| Associated_feature | WBsf649108 | ||||||||
| WBsf664156 | |||||||||
| WBsf664157 | |||||||||
| WBsf664158 | |||||||||
| WBsf983451 | |||||||||
| WBsf983452 | |||||||||
| WBsf1009687 | |||||||||
| WBsf219290 | |||||||||
| WBsf219291 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00042489 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00042484 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00029807 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00042483 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00003151 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00001753 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00003152 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00117056 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram462 | ||||||||
| Chronogram1527 | |||||||||
| Expr1011615 | |||||||||
| Expr1037157 | |||||||||
| Expr1146469 | |||||||||
| Expr1146470 | |||||||||
| Expr1146475 | |||||||||
| Expr2017728 | |||||||||
| Expr2035866 | |||||||||
| Drives_construct | WBCnstr00002354 | ||||||||
| WBCnstr00003074 | |||||||||
| Microarray_results (63) | |||||||||
| Expression_cluster (154) | |||||||||
| Interaction (14) | |||||||||
| Map_info | Map | I | Position | -1.03737 | |||||
| Positive | Positive_clone | C44E4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00050351 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064339 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
